Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1008 ATGCTCAAGCAATTCCTCAGTAAACTTCCTCGAAAGGCATCGAAACTTGACTCGGACGAGTCAACCCGGGTCAATTCGTTGCGTTCGGACTCATCGGCCGGAAAAAATCACCGGCCACACGGCGATAATAATAGCAATATAGCGAAAAGAACATCATCGTCTGCGGTTTTTCCGTCGAGCACCGTGGCTGGGATTGAACCGTTGTTGCCTTTTAAGGATGTTCCAAATGGTGAGAGGATGAACCTGTTTGTGAGCAAGTTGAGCCTTTGTTGCGTGATCTTCGATTTCAGTGACCCAGCGAAAAGCATAGTTGAGAAAGATGTAAAGAGGAGAACTTTGGTTGAACTTGTTGATTTTGTGGCCAATGTGAACATGAAATTTAGTGAACCTGCTACCCTTGCTATGTGTAGAATGTGTGCTGTTAATCTCTTTAGAGTTTTCCCGCCAAATTATGGGTCGAATCGTGGTGGTGGTGGTGGTGGTGAGAATGATGATGATGAACCAACTTTTGATCCTGCTTGGGCACATTTGCAGCTTGTGTATGAATTGTTGCTTAAATTTATTAGTTCTACTTACCTTGATGCGAAGGTAGCAAAGAAGTACATTGATCATTGGTTTATTTCGAGGTTGCTTGAGTTGTTCGATGCAGAGGATCCTAGGGAAAAAGACTGTTTGAAAACAATCCTGCATAGAGTTTATGGGAAATTCATGGTGCATAGACCCTTTATTCGGAAATCAATTAACAATATATTTTATAGGTTTGTGTTTGAGACTGAGAAACACAACGGGGTTGCTGAGTTGTTGGAGATTTCTGGGAGCATAATCAGTGGTTTTGCTTTGCCATTGAAAGAGGAACACAAGATGTTCTTGTGGAGGGTTTTGATCCCTTTGCACAAGCCAAAATCTATGGGGATCTACTTCCAGCAATTGACATACTGTGTTACGCAGTTCATAGAGAAGGAGCCCAAGTTGGCGAGCACTGTGATAATGGGTTTGTTAAAATATTGGCCAATTACAAATAGTCAGAAAGAGGTCATGTTCCTGGGTGAACTCGAAGAAATTTTGGAAGCAATTAACATGGTAGAGTTCCAGAAGGTCATGGACCCATTGTTTTGGCGGATTGGATACTGCATGAACAGCTTACACTTTCAGGTAGCTGAAAGAGCACTTTTCTTATGGAACAACGACCACATTGTCAATTTGATTGCTCACAACCGTCAGGTGATCCTCCCGATTATATTTCCAGCTTTAGATAGGAACTCTCAAAGCCATTGGAACCAGGCAGTGCTCAACTTAACTCATAATGTAAGAAAGATGTTCATGGAGATGGATGAGAAGCTGTACCTGTCATGTCATTCTCATTTTAAGGAGGAAGAAGCGATGTCAAGCACCGCAGCCGAGAAGCGAAAGGAAGCATGGAAACAACTAGAGCGTGTAGCCAGTCTCAAGCCTGTAATTGGAAATACTGCAGTTTTAGTGTCTCCAATCTGA 1491 0.4259 MLKQFLSKLPRKASKLDSDESTRVNSLRSDSSAGKNHRPHGDNNSNIAKRTSSSAVFPSSTVAGIEPLLPFKDVPNGERMNLFVSKLSLCCVIFDFSDPAKSIVEKDVKRRTLVELVDFVANVNMKFSEPATLAMCRMCAVNLFRVFPPNYGSNRGGGGGGENDDDEPTFDPAWAHLQLVYELLLKFISSTYLDAKVAKKYIDHWFISRLLELFDAEDPREKDCLKTILHRVYGKFMVHRPFIRKSINNIFYRFVFETEKHNGVAELLEISGSIISGFALPLKEEHKMFLWRVLIPLHKPKSMGIYFQQLTYCVTQFIEKEPKLASTVIMGLLKYWPITNSQKEVMFLGELEEILEAINMVEFQKVMDPLFWRIGYCMNSLHFQVAERALFLWNNDHIVNLIAHNRQVILPIIFPALDRNSQSHWNQAVLNLTHNVRKMFMEMDEKLYLSCHSHFKEEEAMSSTAAEKRKEAWKQLERVASLKPVIGNTAVLVSPI* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1008 496 PIRSF PP2A_B56 5 493 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lan15g1008 496 MobiDBLite consensus disorder prediction 1 52 - -
Lan15g1008 496 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 494 - -
Lan15g1008 496 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 494 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lan15g1008 496 Gene3D - 75 479 IPR011989 -
Lan15g1008 496 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 70 480 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lan15g1008 496 MobiDBLite consensus disorder prediction 25 52 - -
Lan15g1008 496 MobiDBLite consensus disorder prediction 10 24 - -
Lan15g1008 496 SUPERFAMILY ARM repeat 81 476 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1008 Lan-Chr15 19252592 19255667 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1008 K11584 - gmx:100775273 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1008 15 19252592 19255667 Lan14g0791 14 14798235 14800589 LSH
Lan6g1763 6 28872434 28875434 Lan15g1008 15 19252592 19255667 PCT
Lan15g1008 15 19252592 19255667 Lan6g1763 6 28872434 28875434 PCT