Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1649 ATGGATCCTTTGTCTCTCTCAAACGATGCCGTTTCAACTTTGATGGATAAGGAGTCAATGGTTGACCCCTTCTTGGTCGAGGCTCTCCAGAACCCTCGTCACCGTCTCACTATTTTGCGGATGGAGCTGGATATCCAAAGGTTTCTGAATAATGCTGATCAGCAGCATTTTGAGTTCCAACATTTCCCTTCTTCCTATCTCCGACTGGCTGCACATCGTGTTGCTCAATACTATGGTATGCAGACTATGGTTCAAGATAATAGCTTAGATGGTCAGGGAAGTAAAATTCTGGTGAGAAAGCTAGCAGAAAGCAAGTATCCAATGGTTCGCTTATCTGAAATACCTGTGAAACAGTTGGAAAATGATAAATCTGAGCAGAAAAAAGTTGTCCTCAAACCCAGGCCTAATAAAAATAGTTTCCATGAAGCAAATGAAGCTGGTAAAAAAGGAAATTCCTGGAGAAGTATGGAAGAAAGGAAGGAGGAATATGATCGGGCACGAGCACGTATCTTTAGTAGCTCTGATTCAGATGATATCAAATCCCTGGTTCCAGTGGATGGGAAAACATCTTTTATGAGCAAGGATGAGAATGAAACTAGCAAGAACCCTGTGGCTGATTCAGAGAGAAGCTTAAGTGTCAGGGATATTAATTCTAATCGAGTTGCCATTTTCAGAGATAGGGAAAAGGATCGTACCGATCCAGACTATGATCGAAGCTATGGGAGGTACACTAGGAGTGTTCCAGCCCCAGCTCTTAACTTGGTGCCTTTTAATTTGCAAAATGTTCAACCTTCATTTGCTCAATATGATGCTACTTTTAATCAGTTACCTCAGATTCCACAAACTCAACCTTCACTTGGTTATGGACCTCCTGCAAGCCCGATAATGAGTCCTTTTAGTATCACGGGGTTGAATCAGACACCTAGGGACGGTGCTTACCTACAGTGGCCGAGTCCTACAATGATGTATGCACATTCATATGACCAAATCAGACATGCTGTTTTCCAGGCTCCATTTGGTCAACAACCCTTGACCTTTGACTATTCACAGAACTACTAG 1059 0.4259 MDPLSLSNDAVSTLMDKESMVDPFLVEALQNPRHRLTILRMELDIQRFLNNADQQHFEFQHFPSSYLRLAAHRVAQYYGMQTMVQDNSLDGQGSKILVRKLAESKYPMVRLSEIPVKQLENDKSEQKKVVLKPRPNKNSFHEANEAGKKGNSWRSMEERKEEYDRARARIFSSSDSDDIKSLVPVDGKTSFMSKDENETSKNPVADSERSLSVRDINSNRVAIFRDREKDRTDPDYDRSYGRYTRSVPAPALNLVPFNLQNVQPSFAQYDATFNQLPQIPQTQPSLGYGPPASPIMSPFSITGLNQTPRDGAYLQWPSPTMMYAHSYDQIRHAVFQAPFGQQPLTFDYSQNY* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1649 352 MobiDBLite consensus disorder prediction 188 211 - -
Lan6g1649 352 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 7 351 - -
Lan6g1649 352 MobiDBLite consensus disorder prediction 123 158 - -
Lan6g1649 352 SUPERFAMILY R3H domain 11 122 IPR036867 GO:0003676
Lan6g1649 352 MobiDBLite consensus disorder prediction 138 158 - -
Lan6g1649 352 Gene3D - 12 136 IPR036867 GO:0003676
Lan6g1649 352 PANTHER OS05G0411600 PROTEIN 7 351 - -
Lan6g1649 352 CDD R3H_encore_like 34 100 - -
Lan6g1649 352 Pfam R3H domain 37 87 IPR001374 GO:0003676
Lan6g1649 352 ProSiteProfiles R3H domain profile. 35 102 IPR001374 GO:0003676
Lan6g1649 352 Pfam SUZ domain 125 174 IPR024771 -
Lan6g1649 352 SMART R3H_4 19 101 IPR001374 GO:0003676
Lan6g1649 352 ProSiteProfiles SUZ domain profile. 105 175 IPR024771 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1649 Lan-Chr6 26060428 26064185 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1649 - - gmx:100814835 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0832 10 12194350 12197867 Lan6g1649 6 26060428 26064185 LSH