Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0832 ATGGATACGTTGTCTCCATCAAACGATGCCGTTTCACTTTTGAAAGAGGAGTCAATGGTTGACCCCTTCTTGGTCGAGGCTCTTCAGAATCCTCGTCACCGTCTCACTATTTTGCGGATGGAGCTGGATATCCAGAGGTTTCTGAATAATGCTGATCAGCAGCATTTTGAGTTCCAACATTTCCCTTCTTCCTATCTCCGTCTGGCCGCACATCGTGTTGCTCAACACTATGGTATGCAAACCATGGTTCAAGATAATGGCTTAGACGGACAGGGAAGTAAAATTCTGGTGATAAAGCTAGCAGAAAGCAAGTATCCTATGGTTCGCTTATCTGAAATACCTGTGAAACAGTTGGAAAATGATAAATCTGAGCAGAAAAAAATTGTCCTCAAACCCAGGCCTAATAAAAATAGTTTCAATGAAGCCAATGGAGCTGGTAAAAAAGGAAATCATTGGAGAAGTGTGGAAGAGAGGATGGAAGAATATGATCGGGCACGGGCACGCATCTTCAGTGGCTCTAGAAGCTCTGATTCAGGTGAAGTTCAATCTCTGGTTCCAGTGGATGGGAAGATATCTTTTATGAGCAAGGATGAGAATGAAACAAGCAAGAACCCCGTGGCTGATTCAGAAAGAAGCTTAAGTGTCAGGGATACTAATTCTACCCGAGTTGCCATTTTCAGAGATAGGGAAAAGGATCGTACCGATCCAGATTATGATCGAAGCTATGGAAGGTATGTTAGGAGTATTCCAGCCCCTGCTGTTAACTTGGTGCCTATGAATTTTCAAAATGCTCAACCATCATTTGCTCAATATGATACTACTTTTAATCAGTTGGCTCAGATGCCACAATCTCAACCTTCATTTGGTTATGGACCTCCTGCAAGCCCGATAATGAGTCCTTTTTGTGCCACGGGATTGAATCAGACCCCTAGGGAGGGTGCTTACTTACAGTGGCCAAGTCCTGCAATGATGTATGCTCATTCATATGACCAATTTAGACATGCCGTTATCCGGGCTCCATTTGGTCAACAACCCTTGAGCTGTGATTATTCACAGAATTACTAG 1065 0.4338 MDTLSPSNDAVSLLKEESMVDPFLVEALQNPRHRLTILRMELDIQRFLNNADQQHFEFQHFPSSYLRLAAHRVAQHYGMQTMVQDNGLDGQGSKILVIKLAESKYPMVRLSEIPVKQLENDKSEQKKIVLKPRPNKNSFNEANGAGKKGNHWRSVEERMEEYDRARARIFSGSRSSDSGEVQSLVPVDGKISFMSKDENETSKNPVADSERSLSVRDTNSTRVAIFRDREKDRTDPDYDRSYGRYVRSIPAPAVNLVPMNFQNAQPSFAQYDTTFNQLAQMPQSQPSFGYGPPASPIMSPFCATGLNQTPREGAYLQWPSPAMMYAHSYDQFRHAVIRAPFGQQPLSCDYSQNY* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0832 354 PANTHER OS05G0411600 PROTEIN 12 353 - -
Lan10g0832 354 ProSiteProfiles R3H domain profile. 34 102 IPR001374 GO:0003676
Lan10g0832 354 ProSiteProfiles SUZ domain profile. 104 174 IPR024771 -
Lan10g0832 354 Gene3D - 13 135 IPR036867 GO:0003676
Lan10g0832 354 SUPERFAMILY R3H domain 16 121 IPR036867 GO:0003676
Lan10g0832 354 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 12 353 - -
Lan10g0832 354 MobiDBLite consensus disorder prediction 134 153 - -
Lan10g0832 354 Pfam SUZ domain 124 173 IPR024771 -
Lan10g0832 354 Pfam R3H domain 36 87 IPR001374 GO:0003676
Lan10g0832 354 CDD R3H_encore_like 33 87 - -
Lan10g0832 354 SMART R3H_4 18 100 IPR001374 GO:0003676
Lan10g0832 354 MobiDBLite consensus disorder prediction 195 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0832 Lan-Chr10 12194350 12197867 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0832 - - gmx:100814835 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0832 10 12194350 12197867 Lan6g1649 6 26060428 26064185 LSH