Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1341 ATGCGAGTGAAGGAAATGCACCCTTTATGCTGCATCTCCCTCGAGAATCCAGGGATCGGAAGCCACTCGCCGGAGCCAGACACGGCGTTGCTGTCAAGGACAAAGAGCCTTCCGGCGAGTTTCGCGGCGAGTGGATCTGAACTCGTTAATGGCGGTGGATCGGAGGCGACGGTGGCCGGCATTCTGTATAAGTGGACGAATTACGGCAAAGGATGGAGATCCCGGTGGTTCCTCCTCCGCAATGGAGTCTTAACTTACGCTAAGATCCGGTGGCCGGAAAATCTCAACCTTCTCTCTCCTCTCGACGATGTTCGCCTTATCGGAGAAGTCTCCGCCAATCGCCTCTCCAGGATGGACTCCGCCTCCGCCACCATGCGCCGTAAAAATCACAAACCACCGTCGTCTTCCGGCGTTGTACATCTCAAGATCTCATCATTTAGAGAGAGCAAGTCAGATGATAGGAAGTTCTACATATTTACATCAACAAAGACTCTTCATCTGAGAACAGATTCAAGGAAAGACCGTGTGGCTTGGATTCAAGCTTTGGTGTCAACTCGTGGCTTGTATTCACTTCAACCACTCAATGATCATATCTCACTTGCATCAAATCACATATCTGTATCAACTGAGAGGCTTAAAAAGCGCTTGCTTGAAGAGGGTACCAATGAGAACCTTGTAAAAGAGTGTGAACAAATCATGCTCACTGAGTTCTCTGATTTACAAGGGCAGCTTAAAATCTTATTTCAAGAACGAACAGATTTGCTTGATACAATAAGGCAGTTGGAGGCAGCTAATGTTGAAGCCGATGCATCTGCCATACATGACAGTGAATACCAATTAACCAAGAATGTATTATCAAGGCTAGGACGTGGAAAATTTAGTGAATGCAGTACAACTGAATCATCCGATGATATTGAAAAACAGGAGCTAGAGGAGGTCTCAGATGAAGATGAAATCATATATTATGATACTAGAGAGGATTTTACAGAACCTGGTTTTGAATGTGGGTCAATAGGAGCTCTGGATCAGGTGAACAAGTCTGGGGAAGCTAACACACAATGCACTAATATGGAGAATAATTATGTGTATCCTCAGATAGCAAGAAGAAGAAAGCTACCGGATCCCGTTGAGAAAGAGAAGGGCGTTAGTCTTTGGTCGATGATCAAAGACAATGTGGGCAAAGATCTCACACGAGTTTGTCTTCCTGTATATTTTAACGAGCCGATATCATCTCTTCAAAAATGTTTCGAGGACTTGGAGTACTCTTATCTTCTGGATCGAGCTTATGAATATGGAAAATCAGGAAATAGTCTCCAACGGGCGCTGAATGTTGCTGCCTTTGCAGTTTCTGGATATGCATCATCTGAAGGTCGTCACTGTAAACCCTTTAACCCTCTGCTAGGGGAAACTTATGAAGCTGATTACCCTGACAAAGGACTTCGCTTCTTTTCTGAGAAGGTCAGTCACCATCCAACTGTGATTGCATGCCACTGTGAAGGTAAAGGATGGAAGTTTTGGGCTGACAGCAACATCCGTTCAAAGTTTTGGGGGAGGTCAATTCAACTTGACCCAGTTGGAGTTCTGACCCTAGAGTTTGATGATGGTGAAATATTCCAGTGGAGCAAGGTCACAACAACAATTTATAATCTTATCCTTGGCAAAATATATTGTGATCATCATGGAAACATGGATATACGTGGTAATCGCCATCATTCATGCAAACTCAAGTTTAAAGAGCAGTCAATTCTTGACCGAAATCCCCACCAGGTACAAGGGTTTGTTGAAGACGTTATGGGACAAAAGGTTGCCACATTAGTTGGCAAGTGGGATGAAAGCTTGTATTATATTAATGGTGATGTGAATGTGAAGCCAAAAGATTTCACTTCATTAGATGCATCATTGTTGTGGAAAAGGACTATGCCACCTGCCAATCTCACTCGCTACAATTTGACATCATTTGCCATCACACTAAATGAGCTTACTCCAGGACTGAAGGAGAAGCTTCCACCCACGGATTCGAGGTTGAGACCCGATCAGCGGCACCTAGAGAATGGGGAATATGAGAAGGCTAATATAGAGAAACAAAGGTTGGAAAAGAGGCAAAGAATGTCAAGGAAAATGCAAGAAAATGGTTGGAAACCTAGGTGGTTCTACCAAGGAGGTGAAAATGGAACATTTGGATATATTGGCGGATACTGGGAAGCAAGAGCTCAAGGGAAATGGAATGAATGCCCAAATATATTTGGTGAATTTAATGAAGACATTGTTGATCATTCAGATGCATCTTGA 2289 0.4373 MRVKEMHPLCCISLENPGIGSHSPEPDTALLSRTKSLPASFAASGSELVNGGGSEATVAGILYKWTNYGKGWRSRWFLLRNGVLTYAKIRWPENLNLLSPLDDVRLIGEVSANRLSRMDSASATMRRKNHKPPSSSGVVHLKISSFRESKSDDRKFYIFTSTKTLHLRTDSRKDRVAWIQALVSTRGLYSLQPLNDHISLASNHISVSTERLKKRLLEEGTNENLVKECEQIMLTEFSDLQGQLKILFQERTDLLDTIRQLEAANVEADASAIHDSEYQLTKNVLSRLGRGKFSECSTTESSDDIEKQELEEVSDEDEIIYYDTREDFTEPGFECGSIGALDQVNKSGEANTQCTNMENNYVYPQIARRRKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKSGNSLQRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPTVIACHCEGKGWKFWADSNIRSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRHHSCKLKFKEQSILDRNPHQVQGFVEDVMGQKVATLVGKWDESLYYINGDVNVKPKDFTSLDASLLWKRTMPPANLTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEKANIEKQRLEKRQRMSRKMQENGWKPRWFYQGGENGTFGYIGGYWEARAQGKWNECPNIFGEFNEDIVDHSDAS* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1341 762 SUPERFAMILY Oxysterol-binding protein-like 378 756 IPR037239 -
Lan6g1341 762 Gene3D - 469 643 - -
Lan6g1341 762 Pfam Oxysterol-binding protein 383 736 IPR000648 GO:0008289
Lan6g1341 762 Coils Coil 680 700 - -
Lan6g1341 762 Coils Coil 244 264 - -
Lan6g1341 762 SMART PH_update 56 189 IPR001849 -
Lan6g1341 762 Gene3D - 53 187 IPR011993 -
Lan6g1341 762 ProSiteProfiles PH domain profile. 55 187 IPR001849 -
Lan6g1341 762 Gene3D - 679 742 - -
Lan6g1341 762 SUPERFAMILY PH domain-like 55 184 - -
Lan6g1341 762 MobiDBLite consensus disorder prediction 118 137 - -
Lan6g1341 762 Pfam Pleckstrin homology domain 60 182 - -
Lan6g1341 762 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 4 753 - -
Lan6g1341 762 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 753 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1341 Lan-Chr6 15045706 15056308 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1341 K20456 - gmx:100793692 1319.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0901 18 14289656 14305677 Lan6g1341 6 15045706 15056308 PCT