Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0901 ATGCACCCACTGTGCTGCATCTCTCTGGAGAGTCCTCGAATTGGCAACCGTTCGCCGGAACTAGATGCAGCGCCGCTTTCGCGGACGAGGAGCGTCCCAACGGGAATATCTTACGGCAATGCTGGCCAAGAATCGGAGGCTACGGTTGCCGGCGTTCTCTACAAGTGGACCAATTACGGCAAAGGCTGGAGATTCCGTTGGTTCCTTTTGCGAAATGGCGTCCTCTCTTACGCAAAGATCCGCCACCCGGAGAATCTCAATCTTCTCTCACCCTCCCACGACCTCCGCCTTATCGGCCAAATTTCTTCCCACCGCCTCGCTAGGATCAACGCCGCCGCCGCCACGCGACGCAAGCACCACAAAACTCCTGGTGTAGTTCATCTCAAGATTTCGTCATTTAGAGAGAGCAAATCAGATGATCGGCGTTTCTATATATTTACAGCGATGAAGACTCTTCATCTGAGAACTGATTCAAGAAAAGATAGAGTAGAATGGATACAAGCACTATTATCAACTGGTGCAGTGTATCCACTTCAAACTCTCAGTAACCATCTCACTGTTGCACCCACTGGAATAATAAATGTATCAACAGAGCGACTTAAGAAACGTTTGCTTGAAGAGGGTACCGCCGACAACCTCGTACACGAGTGCCAACAAATCATGCTCTCTGAGTGTGACCAAATACATGGTCAACTTGAACTTCTTTGTCAAGAACGTTCTACTTTGCTTGATACAATAATGCACCTTGAGGCAGCTAATATTGAACCTGTGGTCTCTGCAATACATGGCGGTGAATACTCATTAACAAAGAGTAAACTTTCAAATCTAGGACGTGGAAAATATAGTGGTAGGACTGCAAATGCTGCTCTTTATAATTTATACTTTTACTTAATTATGCATTTGGATTTAAGCTCTTATGAGTTTTTTTACAAGTTTCTCGATGATATTACCTATTTCACAGCATTTGCCAGTAAAACCAAATCATTTGAAACAACAATAGAAGCTAAATTCGAGAACATATTTTGCGTGAGAGTGAAAGCGATGCACCCACTGTGCTGCATCTCTCTGGAGAGTCCTCGAATTGGCAACCGTTCGCCGGAACTAGATGCAGCGCCGCTTTCGCGGACGAGGAGCGTCCCAACGGGAATATCTTACGGCAATGCTGGCCAAGAATCGGAGGCTACGGTTGCCGGCGTTCTCTACAAGTGGACCAATTACGGCAAAGGCTGGAGATTCCGTTGGTTCCTTTTGCGAAATGGCGTCCTCTCTTACGCAAAGATCCGCCACCCGGAGAATCTCAATCTTCTCTCACCCTCCCACGACCTCCGCCTTATCGGCCAAATTTCTTCCCACCGCCTCGCTAGGATCAACGCCGCCGCCGCCACGCGACGCAAGCACCACAAAACTCCTGGTGTAGTTCATCTCAAGATTTCGTCATTTAGAGAGAGCAAATCAGATGATCGGCGTTTCTATATATTTACAGCGATGAAGACTCTTCATCTGAGAACTGATTCAAGAAAAGATAGAGTAGAATGGATACAAGCACTATTATCAACTGGTGCAGTGTATCCACTTCAAACTCTCAGTAACCATCTCACTGTTGCACCCACTGGAATAATAAATGTATCAACAGAGCGACTTAAGAAACGTTTGCTTGAAGAGGGTACCGCCGACAACCTCGTACACGAGTGCCAACAAATCATGCTCTCTGAGTGTGACCAAATACATGGTCAACTTGAACTTCTTTGTCAAGAACGTTCTACTTTGCTTGATACAATAATGCACCTTGAGGCAGCTAATATTGAACCTGTGGTCTCTGCAATACATGGCGGTGAATACTCATTAACAAAGAGTAAACTTTCAAATCTAGGACGTGGAAAATATAGTGAATGCAGTACAACTGAATCATCCGATGATATTGAGAAACAGGAGATGGAAGAAGTGTCAGATGAAGATGAAATATCATATTATGATACTAGAGAGTATTTTACTGAGCCTGGTTTTAGGTACGGGTCGACAAGAGATACGGATCAAGTGGATATGGAGAACATTCAACCTGAGAAGGTGGTCTATAATTATAGGCACCCTGAGATAGAAAGACGAAGACTGCTCCCTGATCCTGTTGAGAAAGAGAGGGGTGTAAGTCTTTGGTCAATGATCAAAGACAATGTGGGAAAAGATCTCACACGAGTTTGTCTTCCTGTATTCTTTAATGAGCCGATATCATCCCTTCAAAAATGTTGTGAGGACTTGGAGTACTCTCATCTTCTGGATCAAGCATATGAGTATGGAAAATCAGGAAACAATCTTGTTCGAGCACTGAATGTTGCTGCCTTCGCAATTTCTGGATATGCATCATCTGAAGGCCGTCATTGTAAACCCTTCAATCCCTTGTTAGGAGAAACCTATGAAGCTGACTATCCTGAGAAAGGGATTCGCTTCTTTTCTGAGAAGGTGAGTCACCATCCAACTCTCATTGCCTGCCACTGTGAAGGTCGAGGATGGAAGTTTTGGGCTGACAGCAACATCCATTCGAAGTTTTGGGGAAGGTCAATTCAGCTTGAGCCAGCTGGAGTTCTGACCCTAGAGTTTGATGATGGTGAAATATTTCAATGGAGCAAGGTAACCACAAAAATTTATAATCTTATCCTTGGTAAAATATACTGTGATCATCATGGGAACATGGATATACGTGGTAATCGCCAATATTCATGCAGAATCAAGTTCAAAGAGCAGGCGATTCTTGATCGATATCCTCACCAGGTGCATGGATTTGTTGAAGATGTGACAGGAAAAAAAGTTGCTACATTATTTGGCAAGTGGGATGATAGTATGTATTATGTTAATGGGGATGTGAATGTCAAACCAAAAGATTTCACTTCATCAAATGCATCATTGTTGTGGAAAAGGACCTTGCCACCCACTAATGTCACTCGGTACAATTTGACATCTTTTGCCATCACACTGAATGAACTCACTCTAGGACTAAAGGTGAAGCTCCCACCCACGGATTCCAGGCTCAGACCAGACCAGCGGCATCTAGAGAATGGTGAATATGAGAAGGCTAATTTGGAGAAACAGAGGTTGGAAAAGCGGCAGAGAATGTCAAGAACAATACAAGAAAGTGGTTGGAAGCCGAGGTGGTTCCAAAGAGAAGGTGATAATGAGACATTCCGTTATGTCGGCGGTTATTGGGAAGCAAAAGAGCAAGGAAAATGGGACGGATGCTCAAATATATTTGGTGAGTGTAAGGAAGACATTGTCGATCTTTCGGGTGCATCTTAA 3285 0.4423 MHPLCCISLESPRIGNRSPELDAAPLSRTRSVPTGISYGNAGQESEATVAGVLYKWTNYGKGWRFRWFLLRNGVLSYAKIRHPENLNLLSPSHDLRLIGQISSHRLARINAAAATRRKHHKTPGVVHLKISSFRESKSDDRRFYIFTAMKTLHLRTDSRKDRVEWIQALLSTGAVYPLQTLSNHLTVAPTGIINVSTERLKKRLLEEGTADNLVHECQQIMLSECDQIHGQLELLCQERSTLLDTIMHLEAANIEPVVSAIHGGEYSLTKSKLSNLGRGKYSGRTANAALYNLYFYLIMHLDLSSYEFFYKFLDDITYFTAFASKTKSFETTIEAKFENIFCVRVKAMHPLCCISLESPRIGNRSPELDAAPLSRTRSVPTGISYGNAGQESEATVAGVLYKWTNYGKGWRFRWFLLRNGVLSYAKIRHPENLNLLSPSHDLRLIGQISSHRLARINAAAATRRKHHKTPGVVHLKISSFRESKSDDRRFYIFTAMKTLHLRTDSRKDRVEWIQALLSTGAVYPLQTLSNHLTVAPTGIINVSTERLKKRLLEEGTADNLVHECQQIMLSECDQIHGQLELLCQERSTLLDTIMHLEAANIEPVVSAIHGGEYSLTKSKLSNLGRGKYSECSTTESSDDIEKQEMEEVSDEDEISYYDTREYFTEPGFRYGSTRDTDQVDMENIQPEKVVYNYRHPEIERRRLLPDPVEKERGVSLWSMIKDNVGKDLTRVCLPVFFNEPISSLQKCCEDLEYSHLLDQAYEYGKSGNNLVRALNVAAFAISGYASSEGRHCKPFNPLLGETYEADYPEKGIRFFSEKVSHHPTLIACHCEGRGWKFWADSNIHSKFWGRSIQLEPAGVLTLEFDDGEIFQWSKVTTKIYNLILGKIYCDHHGNMDIRGNRQYSCRIKFKEQAILDRYPHQVHGFVEDVTGKKVATLFGKWDDSMYYVNGDVNVKPKDFTSSNASLLWKRTLPPTNVTRYNLTSFAITLNELTLGLKVKLPPTDSRLRPDQRHLENGEYEKANLEKQRLEKRQRMSRTIQESGWKPRWFQREGDNETFRYVGGYWEAKEQGKWDGCSNIFGECKEDIVDLSGAS* 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0901 1094 SUPERFAMILY Oxysterol-binding protein-like 710 1084 IPR037239 -
Lan18g0901 1094 ProSiteProfiles PH domain profile. 393 521 IPR001849 -
Lan18g0901 1094 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 346 1085 IPR000648 GO:0008289
Lan18g0901 1094 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 288 IPR000648 GO:0008289
Lan18g0901 1094 Coils Coil 1012 1041 - -
Lan18g0901 1094 SUPERFAMILY PH domain-like 47 170 - -
Lan18g0901 1094 Pfam Pleckstrin homology domain 398 516 - -
Lan18g0901 1094 Pfam Pleckstrin homology domain 51 169 - -
Lan18g0901 1094 SUPERFAMILY PH domain-like 394 517 - -
Lan18g0901 1094 Gene3D - 1011 1079 - -
Lan18g0901 1094 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 346 1085 - -
Lan18g0901 1094 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 2 288 - -
Lan18g0901 1094 Gene3D - 389 521 IPR011993 -
Lan18g0901 1094 Gene3D - 42 174 IPR011993 -
Lan18g0901 1094 SMART PH_update 394 523 IPR001849 -
Lan18g0901 1094 SMART PH_update 47 176 IPR001849 -
Lan18g0901 1094 Pfam Oxysterol-binding protein 715 1069 IPR000648 GO:0008289
Lan18g0901 1094 Gene3D - 801 975 - -
Lan18g0901 1094 ProSiteProfiles PH domain profile. 46 174 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0901 Lan-Chr18 14289656 14305677 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0901 K20456 - gmx:100819924 1241.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0901 18 14289656 14305677 Lan18g0901 18 14289656 14305677 ECH
Lan18g0901 18 14289656 14305677 Lan6g1341 6 15045706 15056308 PCT