Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1083 ATGAACGCTTGTGCTTTTTCTTCAATGAACTTCCCCAGATTCCACCGTTACTTTCGTTTCTCAAAACCCCTCACTCTAGTCTCTCCTTCATCCTCATCAATTATATCTCTTCTCTCCAATCAATTTTCTTCACCTATCACCACAGATACCGCCTCCAACCAGAAAAATGCACCATGGCTTATTGTCGGCCTCGGTAATCCTGGCAAGACTTTTAATGCTACACGCCACAATGTGGGTTTTGAGATGGTTGATGCAATAGCAGAAGCTGAAGGAATATCTATGAACAGTGTTTCCTTCAAAGCCCTGTTTGGAAAAGGTTATATAGGTGACGTGCCGGTTATACTTGCTAAACCACAGACTTTTATGAATTTAAGTGGTCAATCTGTTGGGGCCATAGTTTCATATTACAAGATTCCATTGAAGCAAGTACTTGTGATCTTTGATGACTTGGACTTGCCTTTTGCTAAATTGCGCCTGCTACCAAAGGGTGGACATGGAGGTCACAATGGAATGAAGAGTGTCATTAATCACTTGAAAGGGAATAATGGTTTTCCGCGATTAAGAATGGGCATCGGACGACCTCCGGGGAAAATGGATCCTGTAGCCTTTGTTCTTCGCTCTTTCACGAAACAAGAGAGGGGAGAGTTGAATTTTACATTACAACATGAGTTAGAGCAGTGTGGATTCTTTTGGTGA 696 0.4224 MNACAFSSMNFPRFHRYFRFSKPLTLVSPSSSSIISLLSNQFSSPITTDTASNQKNAPWLIVGLGNPGKTFNATRHNVGFEMVDAIAEAEGISMNSVSFKALFGKGYIGDVPVILAKPQTFMNLSGQSVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGHNGMKSVINHLKGNNGFPRLRMGIGRPPGKMDPVAFVLRSFTKQERGELNFTLQHELEQCGFFW* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1083 231 Hamap Peptidyl-tRNA hydrolase [pth]. 58 229 IPR001328 GO:0004045
Lan6g1083 231 Pfam Peptidyl-tRNA hydrolase 60 222 IPR001328 GO:0004045
Lan6g1083 231 PANTHER PEPTIDYL-TRNA HYDROLASE CHLOROPLASTIC 24 225 - -
Lan6g1083 231 ProSitePatterns Peptidyl-tRNA hydrolase signature 1. 71 84 IPR018171 GO:0004045
Lan6g1083 231 Gene3D - 44 230 IPR036416 GO:0004045
Lan6g1083 231 TIGRFAM pth: aminoacyl-tRNA hydrolase 60 227 IPR001328 GO:0004045
Lan6g1083 231 ProSitePatterns Peptidyl-tRNA hydrolase signature 2. 164 174 IPR018171 GO:0004045
Lan6g1083 231 PANTHER PEPTIDYL-TRNA HYDROLASE 24 225 IPR001328 GO:0004045
Lan6g1083 231 SUPERFAMILY Peptidyl-tRNA hydrolase-like 58 225 IPR036416 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1083 Lan-Chr6 10482095 10493211 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1083 K01056 - gmx:100526866 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0267 18 3887655 3892264 Lan6g1083 6 10482095 10493211 LSH