Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0267 ATGAACCTTTGTGCTTCTTCTTCCTTATTATCTATGAACTTCCCCAGATTCCGTTGTTGTTCATTTTTCTCAAAACCTTTAAGCCTAATCTCTCTTTCTTCATCTTCTTCAGTTATTACTTCTCTTTACTCCAATCAAAATTCTTCAGCAATGGCAGCAGAAGCAGCAGCTTCAATCACCACAGAGGCCACGAAGAAGAAGAACGAACCTTGGCTCATTGTTGGTCTCGGTAATCCTGGCAAGAAGTACGCTGGCACCAGGCACAATGTAGGTTTTGAGATGGTTGATGCTATTGCAGAAGCAGAAGGAATATCTATGACCAGCGTTTCCTTCAAAGCTATATTTGGAAAAGGTTATATAGGTGACCTACCGGTTATACTTGCAAAACCACAGACTTTTATGAATTCAAGTGGTGAATCTGTTGGAGCCATAGTTTCATATTACAAGATTCCATTGAAGCAAGTACTTGTGATCTTTGATGACTTGGATTTGCCTTTCGCTAAATTGCGGCTGCTACCAAAGGGTGGACATGGAGGTCACAATGGAATGAAGAGTGTTATTAATCACTTGAAAGGGAATAATGGCTTTCCGCGATTAAGAATCGGAATTGGACGGCCTCCTGGGAAAATGGATCCTGTAGGGTTTGTTCTTCGTCCTTTCACTAAACAGGAAAGAGAAGAGTTGGATTTTACATTACAACATGGATTGGAAGCAGTACGGATTCTTTTGCTAGAAGGGTTTGATAAAAGTGCAACAGTTGTTAATAGTGCCAAGAAGATAGAGCAAATTGGTTAA 795 0.4038 MNLCASSSLLSMNFPRFRCCSFFSKPLSLISLSSSSSVITSLYSNQNSSAMAAEAAASITTEATKKKNEPWLIVGLGNPGKKYAGTRHNVGFEMVDAIAEAEGISMTSVSFKAIFGKGYIGDLPVILAKPQTFMNSSGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGHNGMKSVINHLKGNNGFPRLRIGIGRPPGKMDPVGFVLRPFTKQEREELDFTLQHGLEAVRILLLEGFDKSATVVNSAKKIEQIG* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0267 264 PANTHER PEPTIDYL-TRNA HYDROLASE CHLOROPLASTIC 29 258 - -
Lan18g0267 264 SUPERFAMILY Peptidyl-tRNA hydrolase-like 70 255 IPR036416 GO:0004045
Lan18g0267 264 ProSitePatterns Peptidyl-tRNA hydrolase signature 1. 83 96 IPR018171 GO:0004045
Lan18g0267 264 Hamap Peptidyl-tRNA hydrolase [pth]. 70 248 IPR001328 GO:0004045
Lan18g0267 264 Gene3D - 55 258 IPR036416 GO:0004045
Lan18g0267 264 PANTHER PEPTIDYL-TRNA HYDROLASE 29 258 IPR001328 GO:0004045
Lan18g0267 264 Pfam Peptidyl-tRNA hydrolase 72 251 IPR001328 GO:0004045
Lan18g0267 264 TIGRFAM pth: aminoacyl-tRNA hydrolase 72 254 IPR001328 GO:0004045
Lan18g0267 264 ProSitePatterns Peptidyl-tRNA hydrolase signature 2. 176 186 IPR018171 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0267 Lan-Chr18 3887655 3892264 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0267 K01056 - gmx:100526866 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0267 18 3887655 3892264 Lan18g0267 18 3887655 3892264 ECH
Lan18g0267 18 3887655 3892264 Lan6g1083 6 10482095 10493211 LSH