Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0686 ATGACGGTGGAGTATTCGTGCTGTGAAACAGAGTTCTTTGTACACATACTAGTAATTGTGTTGCTGGTTTTGTTCGCTGGGTTGATGTCAGGACTCACTTTGGGGCTCATGTCTTTGAGTCTAGTTGATCTTGAAGTTCTCGCTAAGTCTGGTACTCCTCAGGATCGTAAGCATGCTGAGAAGATATTGCCTGTTGTCAGAAATCAACATTTGTTGCTTTGCACCCTGCTTATTTGTAATGCTGCAGCCATGGAGACGCTTCCTATTTTTCTTGATAGTCTTGTTACTGCATGGGGTGCTATCCTGATTTCTGTGACATTAATTCTTCTGTTCGGTGAGATTATACCCCAATCAGTTTGTTCCCGATATGGTTTAGCAATTGGTGCAACCGTGGCTCCCTTTGTCCGTGTACTTGTATGGGTTTGTTCTCCCGTTGCTTTTCCAATTAGCAAGTTGTTGGACTATTTGCTTGGCCATCGTCAAGAAGCTCTTTTCCGCAGAGCCGAGTTAAAAACACTTGTGAATTTGCATGGCAATGAGGCTGGAAAAGGTGGGGAACTGACACATGATGAAACAACAATCATTGCTGGGGCGCTTGAACTCAGTGAGAAGACAGCCAGTGATGCCATGACTCCTATTTCTGAAACGTTTGCCATTGATATTAATTCAAACCTTGATAGGGAACTGATGAATGAAATATTGGAGAATGGGCATAGTAGAATCCCAGTCTATTATGAGCAGCCTACAAACATTATTGGACTTGTTCTGGTTAAGAATTTATTAACAATTCATCCAGAAGATGAAACACCTGTGAAGAGTGTAACCATACGCAGGATTCCAAGGGTTCCAGAAAGTATGCCACTTTATGACATTTTGAATGAATTCCAGAAGGGCCATAGCCACATGGCTATTGTTGTAAGACGGTGTGACAAGACAGGACAACAATCTTCCAAAAACTATGCCGATGTGAGAGATGTGAAGGTAGATATTGATGGTGAAAAGCCTCCCCAAGAGAAAGTTGGAAAACCCAAAATGGCAATCCATAAGTGGAAAAGCTTTCCTAATACAAACAAGTCAATTAAGGGTGGTTCTCGGAGCAGAAAATGGTCAAAAAATATGTACTCAGATATTTTGGAGATTGATGGTAGTCCCCTTCCAAAGCTCCCTGAAGAGGAAGAAGCTGTTGGATTAATTACGATGGAAGATGTCATTGAAGAGCTTTTACAGGAGGAGATCTTTGATGAAACAGATCATCATTTTGAAGACTCATGA 1272 0.4159 MTVEYSCCETEFFVHILVIVLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDRKHAEKILPVVRNQHLLLCTLLICNAAAMETLPIFLDSLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGATVAPFVRVLVWVCSPVAFPISKLLDYLLGHRQEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPISETFAIDINSNLDRELMNEILENGHSRIPVYYEQPTNIIGLVLVKNLLTIHPEDETPVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAIVVRRCDKTGQQSSKNYADVRDVKVDIDGEKPPQEKVGKPKMAIHKWKSFPNTNKSIKGGSRSRKWSKNMYSDILEIDGSPLPKLPEEEEAVGLITMEDVIEELLQEEIFDETDHHFEDS* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0686 423 SUPERFAMILY CBS-domain pair 194 409 IPR046342 -
Lan6g0686 423 Gene3D - 378 415 IPR046342 -
Lan6g0686 423 Gene3D - 191 325 IPR046342 -
Lan6g0686 423 ProSiteProfiles CBS domain profile. 210 271 IPR000644 -
Lan6g0686 423 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Lan6g0686 423 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Lan6g0686 423 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Lan6g0686 423 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 423 IPR045095 GO:0010960
Lan6g0686 423 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0686 Lan-Chr6 6068932 6074425 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0686 K16302 - gmx:100801937 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0608 18 11147381 11152196 Lan6g0686 6 6068932 6074425 LSH