Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0608 ATGTCGGTGGAGTATACGTGCTGTCAAACACAGTTCTTTGTAAACATCGCAATAATAGTGCTACTGGTTTTGTTCGCTGGTATGATGTCGGGTCTCACTTTGGGGCTTATGTCTATGAGTCTAGTTGATCTTGAAGTTCTCGCTAAGTCTGGTTCTCCTCAGGATCGTAAGCACGCCGAGAAAATATTGCCTGTTGTCAAAAATCAACACTTGTTGCTTTGCACCCTGCTAATTTGCAATGCTGCAGCCATGGAGGCGCTTCCTATTTTTCTTGACAGTCTTATTACTGCATGGGGTGCTATCTTGATTTCGGTGACATTAATTCTTCTGTTTGGCGAGATTATACCCCAATCAGTTTGTACTCGGTATGGTTTAGCAATTGGTGCAACTGTGGCTCCCTTTGTCCGCGTACTTGTATGGATATGTTCTCCCATTGCTTTCCCAATTAGCAAGCTGTTGGACTATTTTCTGGGCCATCGCCAAGAAGCTCTTTTCCGCAGAGCCGAGTTAAAAACACTTGTGAATTTCCATGGCAATGAGGCTGGAAAAGGCGGGGAACTGACACATGACGAAACAACGATCATTGCTGGGGCACTTGAGCTTAGTGCAAAGACAGCCAGTGATGTCATGACTCCTATATCTGAAACGTTTTCCGTTGATATTAACTCAAAGCTTGATAGGGAACTGATGACTGAAATATTGGAGAATGGACATAGCAGAATCCCAGTCTATTATGAGCAGCCTACAAACATTATCGGACTCGTGCTGGTAAAGAATTTATTAACAATTCATCCAGAAGACGAAACACCAGTGAAGAGTGTAACTATACGCAGGATTCCAAGGGTTCCAGAAAGTATAGCACTTTATGACATTTTGAATGAGTTCCAGAAGGGCCATAGCCACATGGCTGTTGTTGTACGCCGGAGTGAGAAGACAAAGCAGCAATCTTCTCAAAATAATGCCGATGAGTCAGTGAGAGATGTGAAGGTGGATATTGATGGTGAAAAGCCTCACCAAGAGAAAGTTATGAAACCCAAATTGCCGATCCAAAGGTGGAAAAACTTTCCAAATACAAACAAGTCATTTAAGGGTGGTTCTCGGAGCAAAAGATGGTCGGAAAATATGTACTCGGATATTTTGGAGATAGACGGCAATCCGCTTCCAAACCTCCCTGAAGAAGAAGAAGCTGTTGGATTAATTACTATGGAAGATGTCATTGAAGAGCTTTTACAGGAGGAAATCTTTGATGAGACAGATTATCATTTTGAAGACTCATGA 1278 0.4257 MSVEYTCCQTQFFVNIAIIVLLVLFAGMMSGLTLGLMSMSLVDLEVLAKSGSPQDRKHAEKILPVVKNQHLLLCTLLICNAAAMEALPIFLDSLITAWGAILISVTLILLFGEIIPQSVCTRYGLAIGATVAPFVRVLVWICSPIAFPISKLLDYFLGHRQEALFRRAELKTLVNFHGNEAGKGGELTHDETTIIAGALELSAKTASDVMTPISETFSVDINSKLDRELMTEILENGHSRIPVYYEQPTNIIGLVLVKNLLTIHPEDETPVKSVTIRRIPRVPESIALYDILNEFQKGHSHMAVVVRRSEKTKQQSSQNNADESVRDVKVDIDGEKPHQEKVMKPKLPIQRWKNFPNTNKSFKGGSRSKRWSENMYSDILEIDGNPLPNLPEEEEAVGLITMEDVIEELLQEEIFDETDYHFEDS* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0608 425 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 425 IPR045095 GO:0010960
Lan18g0608 425 Pfam Cyclin M transmembrane N-terminal domain 18 189 IPR002550 -
Lan18g0608 425 Gene3D - 380 417 IPR046342 -
Lan18g0608 425 SUPERFAMILY CBS-domain pair 194 411 IPR046342 -
Lan18g0608 425 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 425 - -
Lan18g0608 425 ProSiteProfiles CBS domain profile. 210 271 IPR000644 -
Lan18g0608 425 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Lan18g0608 425 Gene3D - 189 325 IPR046342 -
Lan18g0608 425 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0608 Lan-Chr18 11147381 11152196 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0608 K16302 - gmx:100801937 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0608 18 11147381 11152196 Lan18g0608 18 11147381 11152196 ECH
Lan18g0608 18 11147381 11152196 Lan6g0686 6 6068932 6074425 LSH