Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0476 ATGTCCTCTAAATTAACCAAGCATGGATCATCATCTATGGTTCGGAAGATCACACAGCTGAGTAGTGATCTCGATCAAGAAAGCGAAAATGTGAGTGTTGGCCTTGCTACTTATACAGTGCACATTCCTCCAACCCCAGATAACCAGCCTATGGAGATTGCTCTGGAGAGGTCCAATACAAGGAGAGTGGTGGACCAGTATGCATCTAGTTCTATTTTTACTGGTGGCTTCAATCAGGCTACACGAGCGCATTTTATGGAGACGGTGACCGAATCTGATTCCAGCGACCCTCAGATGACTGGTACGAACGGGTCATCTTGTGCAGTTCCTGGTTGTGGTGGAAAGCTCTTGGCTGATGAGAGAGGACTGGATATACTTTATTGTGATTGTGGTTACAAGATCTGTAGGGATTGTCATAGAGATGCTTTGAGTTCTGATGAGGGGATTTGCCCTGGGTGCAAAGAGCCTTTCAAGGATTTGGATATGCAAGATGCTTCTATGGTCAACCACCAGGCGCTGCCCTTGCCACACGGTGATGAGGTGCCCAGGATGGAGAGGAGGATGTCACTGATGAAATCGGGACCGTTGGCCAGGAGCCAAACTAATGATCAAAATTTGTCGAGGAGCGAAACTAATGAATTTGATCATACTCAATGGTTGTTTGAAACTAAGGGGAGCTATGGATATGGGAACGCTATGTGGCCAAAAGATTCTGAGAATGATGCTAGTTCTGGTTCTGAATGGATGGGTGGTGACCCTAATGCATTCCAGGATAAGCAGTGGAAACCTTTGACCCGGAAATTGAGTATTTCTGCTGCAATTCTTAGTCCATACCGACTCATAATATTCATCCGGCTGGTGGTGCTTGGTTTTTTTCTAACATGGAGGGTCCAACATCCCAATGATGAAGCAGTATGGCTGTGGGGTATGTCTGTGGTTTGCGAAATCTGGTTTGCCTTCTCTTGGTTGCTTGATCAGCTTCCTAAGCTCTACCCCATAAATCGTGTTGCTGATCTTGATGTCTTAAAAGAGAAGTTTGAAACTCCCAGTCCCCTCAATCCTGCTGGCAAGTCGGATCTTCCAGGAATGGACATTTTTGTGTCAACTGCAGATCCGGAAAAAGAGCCGCCACTTGTCACTGCAAATACTATTCTTTCTATTCTTGCTGTTGATTATCCTGTTGAGAAACTTTCATGTTATGTCTCTGATGATGGAGGTGCCCTTCTAACTTTTGAGGCCATGGCAGAGGCTGCAAGTTTTGCCAATTTGTGGGTTCCTTTTTGTCGGAAGCATGACATTGAACCTAGGAACCCAGAATCTTATTTTAGTCTAAAGAAAGATCCTTACAAGAACAAGGTACGTTCTGACTTTGTAAGGGATCGCAGGCGGGTAAAGCGAGAGTATGACGAGTTCAAGGTCCGGGTTAATGCCCTTCCTGATTCGATCCGGAGGCGTTCTGATGCTTACAATGCCAGAGAGGAGATCAAAGCTATGAAGCTCTGGAGAGAGAAGGGAACCGATGAACCAAGGGAGAGTATGAAAATTTCTAAAGCTACTTGGATGAATGATGGTACACACTGGCCTGGGACTTGGACAACTAGTGCACCGGAACATTCCAGGGGTGACCATGCCAGTATCGTTCAGGTAATGATAAAACCCCCAAATGATGAACCACTGGCAGGCACAACATCAGATTCAACCGACATTGATTTAACTGAAGTTGATATTCGTCTACCTATGCTTGTCTATGTGTCTCGTGAAAAACGACCTGGATATGATCACAACAAGAAAGCTGGGGCCATGAATGCCCTGGTTCGAGCCTCAGCCATAATGTCCAATGGCGCTTTCATACTTAACCTTGACTGTGATCACTATGTATATAACTCCGAGGCACTGAGGGAAGGCATGTGCTACATGTTAGACCGTGGTGGGGAAAGTATCTGCTATGTTCAATTCCCGCAAAGGTTTGAAGGAATTGATCCTTCTGATCGCTATGCCAATCATAACACTGTCTTCTTTGATGTCAATATGCGGGCTCTTGATGGACTTCAAGGTCCTGTATATGTTGGCACTGGATGCCTATTCCGAAGGATTGCACTTTATGGATTTGATCCACCAACAGTTAAAGAAGAAACCGGTTGGTTTGGTCGTAAGAATAAGAAATCCTCGTCGGTTGCCTCTGTCCCTGAAGTTGGTTATTCTGAGGACCAGTCATTGAGAAATGGCAGCACTGATGATGAAGAAATGAACATTCTTCTTATTCCTAAGGGTTTTGGCAATTCTAGTCTCTTCGTTGACTCAATTAGGTTGGCGGAATACCAAGGGCGTCCCCTTGCTGATCATCAATCTATCAAGAACGGACGACCTCCAGGTGCTCTAATCCGTCCTCGGGAACCTCTGGATGCTGCGACTGTTGCCGAGGCAATCAGTGTTATCTCATGCTGGTATGAAGATAAGACTGAATGGGGCGATAGAGTTGGATGGATTTATGGATCGGTAACTGAGGATGTTGTGACAGGTTATAGAATGCACAACAGAGGATGGAGGTCTATATATTGTGTGACCAAGAGGGATGCTTTTCATGGCACTGCTCCAATCAATCTGACTGATCGGCTTCACCAGGTTCTTCGATGGGCAACCGGCTCTGTTGAAATATTCTTTTCGCGTAACAATGCTCTTTTAGCTAGCTCTAGAATGATGTTCCTGCAGAGGATTGCTTACCTTAATGTTGGAATCTACCCTTTTACTTCCATCTTTCTCATTGTTTACTGCTTCGTTCCTGCACTTTCCCTCTTCACTGGGAAGTTCATTGTCCAGACCCTTCAAATAACCTTCCTAGTTTATTTATTGGGCATCACAATAACCCTTGTTTTACTCGCCGTTCTGGAGGTCAAGTGGTCTGGTATTGACCTTGAAGAGTGGTGGAGGAATGAGCAATTCTGGTTGATTGGAGGCACAAGTGCCCATCTTGCTGCTGTCCTTCAAGGTCTACTAAAGGTGATAGCTGGCATTGAGATATCATTCACCTTGACATCAAAATCTGGCGGTGATGATGAAAACGATGAATTCGCTGATCTTTATATGCTCAAGTGGACCTCTCTTATGATACCGCCACTCACAATCATGATGATGAATGTGATAGCAATAGCTGTGGCAGTTAGCCGGACCATATACAGCAATGATAATAAGTGGAGCAGTTTGCTCGGAGGTGTGTTCTTCAGTTTTTGGGTGTTGGCTCATCTGTATCCCTTTGCAAAGGGACTTATGGGTAGAAGAGGTAGGACTCCTACTATTGTGTATGTATGGGCAGGTCTAATATCAATCACTATTTCACTCCTTTGGGTTGCTATTAGCCCTCCCTCTGGAAACAGCCAAATTGGAGGGTCATTCCAATTCCCTTGA 3402 0.4512 MSSKLTKHGSSSMVRKITQLSSDLDQESENVSVGLATYTVHIPPTPDNQPMEIALERSNTRRVVDQYASSSIFTGGFNQATRAHFMETVTESDSSDPQMTGTNGSSCAVPGCGGKLLADERGLDILYCDCGYKICRDCHRDALSSDEGICPGCKEPFKDLDMQDASMVNHQALPLPHGDEVPRMERRMSLMKSGPLARSQTNDQNLSRSETNEFDHTQWLFETKGSYGYGNAMWPKDSENDASSGSEWMGGDPNAFQDKQWKPLTRKLSISAAILSPYRLIIFIRLVVLGFFLTWRVQHPNDEAVWLWGMSVVCEIWFAFSWLLDQLPKLYPINRVADLDVLKEKFETPSPLNPAGKSDLPGMDIFVSTADPEKEPPLVTANTILSILAVDYPVEKLSCYVSDDGGALLTFEAMAEAASFANLWVPFCRKHDIEPRNPESYFSLKKDPYKNKVRSDFVRDRRRVKREYDEFKVRVNALPDSIRRRSDAYNAREEIKAMKLWREKGTDEPRESMKISKATWMNDGTHWPGTWTTSAPEHSRGDHASIVQVMIKPPNDEPLAGTTSDSTDIDLTEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGAFILNLDCDHYVYNSEALREGMCYMLDRGGESICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPTVKEETGWFGRKNKKSSSVASVPEVGYSEDQSLRNGSTDDEEMNILLIPKGFGNSSLFVDSIRLAEYQGRPLADHQSIKNGRPPGALIRPREPLDAATVAEAISVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSIYCVTKRDAFHGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASSRMMFLQRIAYLNVGIYPFTSIFLIVYCFVPALSLFTGKFIVQTLQITFLVYLLGITITLVLLAVLEVKWSGIDLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDENDEFADLYMLKWTSLMIPPLTIMMMNVIAIAVAVSRTIYSNDNKWSSLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWAGLISITISLLWVAISPPSGNSQIGGSFQFP* 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0476 1133 Pfam Cellulose synthase 363 1123 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lan6g0476 1133 Pfam RING/Ubox like zinc-binding domain 109 158 - -
Lan6g0476 1133 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 48 1131 - -
Lan6g0476 1133 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 564 720 IPR029044 -
Lan6g0476 1133 SUPERFAMILY Nucleotide-diphospho-sugar transferases 378 740 IPR029044 -
Lan6g0476 1133 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 179 IPR013083 -
Lan6g0476 1133 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 48 1131 - -
Lan6g0476 1133 SUPERFAMILY RING/U-box 97 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0476 Lan-Chr6 3934540 3939733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0476 25 1133 Glycosyltransferase AT3G03050 73.053 0.0 1708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0476 K20924 - gmx:100813900 1874.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0789 18 13354306 13359405 Lan6g0476 6 3934540 3939733 LSH