Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0426 ATGGGCAAGAAACACAAAGGGATGTTGACAATGAGGAAAAGATTGGTTTGCTGCAACAAGCAAAGGAAAGTTAGCATCGATCTCGATCAGCAAGAGAGGATTGTGACATACAATGGTCTTGAGAGTTGCATTATAAATAATCAGTCGTATGAACATGAGAGCAGAACTAGCAGAGGAGATGGATGTATAACTGATTCATTTGATGATGATTACTCCACTTGTTCCTCCAGCAAAGACGCTTTTGGATCATTCTCTTCAAAATGTTTGACAATGAAAAGGGATGAACAAGGATTAGAAGAATGGGAACTCTCAGTAAGTCCTCAACATTTTTATGCCAAAGAGAAGCCTTCTTATGCTATCCATCATTCAGATGTAGAAGCCATGAAGGAAAAGTTTGCAAAGCTCTTGCTAGGTGAAGATGTTACAGGAGGAACTAAGAGCCTCAGTACAGCTTTCACCTTATCTAATGCCATCACAAACCTAGCAGTAAATATTTTTGGTGAGCTGTGGAAATTGGAGCCCCTATCTGAAGAAAGGAAAAGCAAATGGCAAAGAGAAATGGGCTGGTTATTGTCTCCTACCAACTATATGGTTGAGCTTGTTCCTGCTAAACAAAGTGGTGCCAATGGTGGAATGTTTGAGATAATGACCCCAAAAGCTCGTGCAGACATCCATATGAATCTTCCAGCACTGCAGAAGCTGGACTCTATGCTTATTGAGGCACTAGATTCGATGGTGAAAACTGAGTTTTGGTATGCAGAGGGAGGAAGCCAAGCAGAAGGGAGGAGCACAACAAGTACATGTCCGAGCAAACGATGGTGGCTTCCATCACCCCAAGTACCCAGAACTGGACTTTCTGACACTGAAAGGAAGAGGTTGCTTCATCATGGAAGGGTGGTATCTCAAGTATTCAAGGCTGCCAAATCTATCAATGAAAATGTGTTGCTTGAAATGCCTGTGCCAGCGAATATCAAGGATGCACTTGAAAAGTCTGGGAAGGCAAACCTTGGACATGAACTGCACAAGGTTTTGACTACTGAATCAAGCTCCGGAGAAGACATGCTTAAATCTCTCAATTTGATCTCTGAACATAGTGCCCTTGAGGTCATTAACAGATTGGAAGCTGCTATCTTCTCATGGAAAGAGAGAAATTCAGAACAATTTACTGGTAAATCACCAGTTCGAACCTCATGGTCTTTTGTAAAAGACCCTATGTCAGAGGTTGATAAAATGGAATTATTATGGGAACGTGCAGAAACACTTTTAAAGCTGCTTAAAACCAGATACCCTAGCATTCCTCAGACATTTCTTGATGCCACTAAAGTTCAATCTGGCAAGGATCTTGGGCACTCTATCTTGGAAGCTTATTCCAGAGTTCTTGGAAATTTAGCTTTCAGCATACTGTCTCGGATAGAAGATATAATGCAGGAGGATTCTTTAAGCAATCCTAATTCACCTCTGGTGACAAGTTGCTCTCCCTGTTTAAATCTCTCCGAAACTTGTGTGATTGGTTCACATATCAGGCACTCTTTACTTGATAAGATGAATATGGCGGACGGAAAGTATTGTGGTTCTAGTTCTGCTACTAATTCTGATATAGAACTCTCATCTATTGGGGGCAAAACTAGCTCTGTAATAACTACACCAAGCCGAAGTCGAGTGTGGTGCATTGGTAGAGAGGCTTGTATGAGTTTGCCTACTCAAAATTCCCCATAA 1716 0.4149 MGKKHKGMLTMRKRLVCCNKQRKVSIDLDQQERIVTYNGLESCIINNQSYEHESRTSRGDGCITDSFDDDYSTCSSSKDAFGSFSSKCLTMKRDEQGLEEWELSVSPQHFYAKEKPSYAIHHSDVEAMKEKFAKLLLGEDVTGGTKSLSTAFTLSNAITNLAVNIFGELWKLEPLSEERKSKWQREMGWLLSPTNYMVELVPAKQSGANGGMFEIMTPKARADIHMNLPALQKLDSMLIEALDSMVKTEFWYAEGGSQAEGRSTTSTCPSKRWWLPSPQVPRTGLSDTERKRLLHHGRVVSQVFKAAKSINENVLLEMPVPANIKDALEKSGKANLGHELHKVLTTESSSGEDMLKSLNLISEHSALEVINRLEAAIFSWKERNSEQFTGKSPVRTSWSFVKDPMSEVDKMELLWERAETLLKLLKTRYPSIPQTFLDATKVQSGKDLGHSILEAYSRVLGNLAFSILSRIEDIMQEDSLSNPNSPLVTSCSPCLNLSETCVIGSHIRHSLLDKMNMADGKYCGSSSATNSDIELSSIGGKTSSVITTPSRSRVWCIGREACMSLPTQNSP* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0426 571 Gene3D PRONE domain, subdomain 1 118 355 - -
Lan6g0426 571 Gene3D PRONE domain, subdomain 1 356 488 - -
Lan6g0426 571 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 14 27 562 - -
Lan6g0426 571 ProSiteProfiles PRONE domain profile. 115 488 IPR005512 GO:0005085
Lan6g0426 571 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 27 562 IPR038937 GO:0005085
Lan6g0426 571 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 123 482 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0426 Lan-Chr6 3569889 3574120 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0426 - - gmx:100818685 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0838 18 13721887 13728976 Lan6g0426 6 3569889 3574120 LSH
Lan6g0426 6 3569889 3574120 Lan6g1528 6 22395005 22403438 PCT
Lan6g1528 6 22395005 22403438 Lan6g0426 6 3569889 3574120 PCT