Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0838 ATGTTGAGAATGAGGAAAAAATTGGCTTGCTGTTACAAGGAACGGAAAATTAGCATCGATCTTGATCAGCAAGAGAGGATTATGACATATAATGGCCTTGAGAGTATCATCCTAAATAATCAGTCTTATGAAGATGAAAGCAGAACTAGCAGAGGAGATGGATGTATAACTGATTCATTTGATGATGATGATTCCACTTGTTCCTCCAGCAAAGATGCTTTAGGATCATTCTCTTCAAAATGTTTGACAACGAAAAGGGATGAACAAGGATTGGAAGAATGGGAACTCTCAGAAAGTCCTCAACACTTTTATGCCAAAGAGAAGCCTTCTTATGCTACCCAACATTCAGATGTGGAAGCCATGAAGGAAAAATTTGCAAAGCTAATGCTAGGTGAAGATGTTACAGGAGGAACTAAGGGTCTCAGTACGGCTTTCGCGCTATCTAATGCCATCACAAGCCTAGCAGTAACTGTTTTCGGCGAGCTGTGGAAATTGGAACCCCTATCCGAAGAAAGGAAGAGCAAATGGCGAAGAGAAATGGACTGGTTGTTGTCTCCTACCAACTATATGGTTGAGCTTGTCCCCACTAAGCAGAGCGGCGCCAATGGTGGAATGTTTGAGATAATGACCCCGAAAGCTCGTGCAGACATCCACATAAATCTTCCAGCACTGCAGAAGTTGGACTCTATGCTTATTGAGGCGCTAGATTCAATGGTGAATACCGAGTTTTGGTATGCAGAGGGAGGAAGCCGAGCAGAAAGGAGGGACACAAGTGGACGACAGAGTAAAAGATGGTGGCTTCCATCACCACAAGTACCGAGAAACGGGCTTTCTGACACTGAAAGAAAGAGGTTGCTTTATCATAGAAGGGTGGTATGTCAAGTATTCAAGGCTGCCAAATCTATCAATGAAAATGTGTTGCTTGAAATGCCTGTGCCAGAAAATATCAAGGATGCACTTGCAAAGTCTGGAAAGGAAAATCTTGGAGAGGAACTGCACAAGGTTTTGACTGCTGAATCAATCTGTGGAGAAGGTATGCTTAAATCTCTCAATTTGACATCTGAACACAGTGCCCTTGAGACAGTTAATAGATTGGAAGCTGCTATACTCTCATGGAAAGAGAGAATTGCAGAACATGTTAGTGTCAAATACTCAGTTCGAGCATCATGGTCATTTGTAAAGGACACTATATCCGAAGTCGACAAAATGGAATCACTATTGGATCATGCTGAAACACTTTTACAGCTGCTTAAAACCAGATACCCTAACCTTCCTCAGACATTTCTTGATGCCACTAAAGTTCAATATGGCAAGGATATTGGGCACTCTATCTTGGAAGCTTATTCCAGAGTCCTTGGAAATTTAGCATTCAGCATTCTATCTAGGATAGGAGATATAATGCAGGAGGATTCAATAAGCAATCCTAATTCACCATTGGTGACAAGTTGCTCTCCTGGGATAAATCTGTGTGAAACTTGGGTGATTGGTTCACATATCAAACACTCTTTACTTGCGAAGATGAACATGACCGACCGAAAGTATTGTGATTCTAGTTCTGCTAGTAATTCTGATATAGAACTCTCATCTATTGAGGCCAAAACTAGCTCTGTAATAGCTACACCAAGCCGAAGTCGAGTGTGGTGCATTGGTAGAGAGGCTTGTACAAGTGTGTCTCCTCGAAGTTCCCCATAG 1692 0.4202 MLRMRKKLACCYKERKISIDLDQQERIMTYNGLESIILNNQSYEDESRTSRGDGCITDSFDDDDSTCSSSKDALGSFSSKCLTTKRDEQGLEEWELSESPQHFYAKEKPSYATQHSDVEAMKEKFAKLMLGEDVTGGTKGLSTAFALSNAITSLAVTVFGELWKLEPLSEERKSKWRREMDWLLSPTNYMVELVPTKQSGANGGMFEIMTPKARADIHINLPALQKLDSMLIEALDSMVNTEFWYAEGGSRAERRDTSGRQSKRWWLPSPQVPRNGLSDTERKRLLYHRRVVCQVFKAAKSINENVLLEMPVPENIKDALAKSGKENLGEELHKVLTAESICGEGMLKSLNLTSEHSALETVNRLEAAILSWKERIAEHVSVKYSVRASWSFVKDTISEVDKMESLLDHAETLLQLLKTRYPNLPQTFLDATKVQYGKDIGHSILEAYSRVLGNLAFSILSRIGDIMQEDSISNPNSPLVTSCSPGINLCETWVIGSHIKHSLLAKMNMTDRKYCDSSSASNSDIELSSIEAKTSSVIATPSRSRVWCIGREACTSVSPRSSP* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0838 563 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 116 474 IPR005512 GO:0005085
Lan18g0838 563 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 14 20 554 - -
Lan18g0838 563 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 20 554 IPR038937 GO:0005085
Lan18g0838 563 Coils Coil 400 420 - -
Lan18g0838 563 Gene3D PRONE domain, subdomain 1 110 347 - -
Lan18g0838 563 Gene3D PRONE domain, subdomain 1 348 480 - -
Lan18g0838 563 ProSiteProfiles PRONE domain profile. 108 480 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0838 Lan-Chr18 13721887 13728976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0838 - - gmx:100778067 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0838 18 13721887 13728976 Lan18g0838 18 13721887 13728976 ECH
Lan18g0838 18 13721887 13728976 Lan6g0426 6 3569889 3574120 LSH
Lan18g0838 18 13721887 13728976 Lan6g1528 6 22395005 22403438 PCT
Lan6g1528 6 22395005 22403438 Lan18g0838 18 13721887 13728976 PCT