LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan6g0326	ATGGCTTCTTCCCAAATCCTTCTTCAGAGGTTTGTGATGCCACAAATTCCGATTGCGAAGGTGGGTTTTGTTTCTTGTTGTCCCACCTCTCGGCTGGGTTATCGTAACACCCCCTTCACTTCAATTTCATGGAGTCACAGTGTTCAAAAACATAGGGCTGGTTTTGTTGTGAGAGCTGAGTCTGAACCCCAAGAAAATGCTCAAAATGTAGAACAAGAAGCGCCTTCAGTTGATGTTGAAGAACAAGAAGAAGAAGTTTCAGAAGCCAAGCCAACCAGAAAACCTCGAGTCAAGCTTGGAGACATCATGGGGATATTGCATAAAAGGGCAATTGAGGCATCGGAAAAGGAGAGGGCCACTCCAGATATTAGGACCGGAGATATTGTGGAAATCAAATTGGAGGTTCCTGAGAACAAACGTAGGTTGTCAATCTATAAAGGTATTGTTATCTCAAGACAAAACTCTGGCATTCACACAACTATTCGAATCCGAAGAATTATTGCTGGTGTTGGGGTTGAGATAGTCTTCCCAGTTTACTCACCAAACATCAAAGAAATCAAAGTAGTGAACCACCGCAAGGTCCGGAGAGCAAGATTGTACTATCTACGCCACAAGCTTCCCAGACTCTCCACTTTCAAATGA	642	0.4361	MASSQILLQRFVMPQIPIAKVGFVSCCPTSRLGYRNTPFTSISWSHSVQKHRAGFVVRAESEPQENAQNVEQEAPSVDVEEQEEEVSEAKPTRKPRVKLGDIMGILHKRAIEASEKERATPDIRTGDIVEIKLEVPENKRRLSIYKGIVISRQNSGIHTTIRIRRIIAGVGVEIVFPVYSPNIKEIKVVNHRKVRRARLYYLRHKLPRLSTFK*	214

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan6g0326	213	TIGRFAM	rplS_bact: ribosomal protein bL19	111	205	IPR001857	GO:0003735\|GO:0005840\|GO:0006412
	Lan6g0326	213	Gene3D	-	64	212	IPR038657	-
	Lan6g0326	213	PANTHER	RIBOSOMAL PROTEIN L19	43	213	IPR001857	GO:0003735\|GO:0005840\|GO:0006412
	Lan6g0326	213	MobiDBLite	consensus disorder prediction	60	93	-	-
	Lan6g0326	213	SUPERFAMILY	Translation proteins SH3-like domain	110	213	IPR008991	-
	Lan6g0326	213	Pfam	Ribosomal protein L19	110	207	IPR001857	GO:0003735\|GO:0005840\|GO:0006412
	Lan6g0326	213	PANTHER	50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED	43	213	-	-
	Lan6g0326	213	PRINTS	Ribosomal protein L19 signature	107	136	IPR001857	GO:0003735\|GO:0005840\|GO:0006412
	Lan6g0326	213	PRINTS	Ribosomal protein L19 signature	166	189	IPR001857	GO:0003735\|GO:0005840\|GO:0006412

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan6g0326	Lan-Chr6	2524207	2526951	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan6g0326	K02884		-	mnt:21406788	233.032

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan17g0408	17	3016025	3018451	Lan6g0326	6	2524207	2526951	LSH