LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan17g0408	ATGCTCATGGCTTCTTCCCAACTCCTTCTTCAGTTTGCGATACCACAATACTCCAACCTATGTTCCCCTCCCATTGGGAAGTTGAGTTTCGTTTCCTCTTGTAGCACCTCTCGTAACATTCCCTTCACCTCAATTTCATGGAGTCACAATGTTAAAAAACATAGGCCTCATTTTGTAGTTAGAGCTGAGTCTCAACCCCAAGAAACTACCGAAAATGTTGAAGAAGAAGAAGAAGAAAAAAAAGAAGAACAAGTTTCGGATCCCAAGCCAGCAAGACAGCCTCGTGTCAAGCTTGGAGACATAATGGGGATATTGCATAAGAGGGCAATTGAGGCATCGGAAAAGGAGAGGGCCACTCCAGATATTAGGACCGGAGATATTGTGGAAATCAAATTGGAGGTTCCTGAGAATAAGCGTAGGTTGTCCATCTATAAAGGTATTGTTATCTCAAGACAAAACTCTGGCATTCATACAACTATTCGAATCCGAAGAATTATTGCTGGTGTTGGGGTTGAGATAGTCTTTCCAGTTTACTCACCAAACATCAAAGAAATCAAAGTAGTGAACCACCGTAAGGTCCGGAGGGCACGATTGTACTATCTACGTGACAAGCTTCCCAGACTCTCCACTTTCAAATGA	639	0.4272	MLMASSQLLLQFAIPQYSNLCSPPIGKLSFVSSCSTSRNIPFTSISWSHNVKKHRPHFVVRAESQPQETTENVEEEEEEKKEEQVSDPKPARQPRVKLGDIMGILHKRAIEASEKERATPDIRTGDIVEIKLEVPENKRRLSIYKGIVISRQNSGIHTTIRIRRIIAGVGVEIVFPVYSPNIKEIKVVNHRKVRRARLYYLRDKLPRLSTFK*	213

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan17g0408	212	SUPERFAMILY	Translation proteins SH3-like domain	109	212	IPR008991	-
	Lan17g0408	212	PANTHER	RIBOSOMAL PROTEIN L19	33	212	IPR001857	GO:0003735\|GO:0005840\|GO:0006412
	Lan17g0408	212	MobiDBLite	consensus disorder prediction	59	94	-	-
	Lan17g0408	212	PRINTS	Ribosomal protein L19 signature	106	135	IPR001857	GO:0003735\|GO:0005840\|GO:0006412
	Lan17g0408	212	PRINTS	Ribosomal protein L19 signature	165	188	IPR001857	GO:0003735\|GO:0005840\|GO:0006412
	Lan17g0408	212	Gene3D	-	99	211	IPR038657	-
	Lan17g0408	212	TIGRFAM	rplS_bact: ribosomal protein bL19	110	204	IPR001857	GO:0003735\|GO:0005840\|GO:0006412
	Lan17g0408	212	Pfam	Ribosomal protein L19	109	206	IPR001857	GO:0003735\|GO:0005840\|GO:0006412
	Lan17g0408	212	PANTHER	50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED	33	212	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan17g0408	Lan-Chr17	3016025	3018451	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan17g0408	K02884		-	gmx:100500328	232.646

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan17g0408	17	3016025	3018451	Lan6g0326	6	2524207	2526951	LSH