Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0309 ATGAAAGCAAGGAGAGGAAAAGGCTCAGAGGCCTTTTGGCCTTCCCTTGTGATGAAGAAATGGTTAAATGTCAAGCCTAAGGTGAATGATTTTAGTGAAGATGAAGTGGACCCTGAAACTGAGAGTGAAGATGATGCTTCATCTCCTAAATATTCAAGAATGTGCGAGCATGACGATAATTCGCTTAGAACACAAGGGATCCAACCCATGTTCTCAAGTAAAACATCAGATGCAACTTGTAAGGCTTTCAAGATAAGACACAGAAGGGGAAAATCAGAAACTCTGCGTGCTCAGTACATAAATAAAAAGGAAGTGAGAGTAGCAATTGGCACTTGGAATGTTGCAGGAAAACATCCACATGAGGATCTTGAGATTGATGAGTGGATTTGTGCTGAAGACCAAGCAGATATTTTCATTCTTGGTTTCCAAGAAGTGGTTCCACTGAGTGCTGGAAATGTACTGGGAGCAGAGGATAATACACCTATTCATAAATGGGAGGCAATCATTCGAAGAACTCTAAACAAATCTTCCAAACCTGAAAATGACGGTAAACATAAAAGCTACAGTGCCCCTCCTTCTCCAGCCTTAAGAACTTCTTCTGTCGCTGATGTCCTAGCAGATAACTTAGATGCTAATGCAATAGTGGAAACTATTGACAATTATGATTTGGAGCAGCCTGAAGTGAAAAACATCATTGGCATACGGAAGAATTTGCATTTGAAGAGATTATATAGCATGAATCTTCGGTCTAAACTGGACTGGCCTGAACGTTCATTGGATGCAATCTCTCAGATTGTTGATTCTGATATAAAGTTGCGTAGAGTACTAAGCGGCTCAGATAGAATCCGCTCTAGTTGGAAGGAGAATGCTTTATTATATAGCAGTGGATTGAAACGTTCACACCACAGTTCTGGAAACTTGGGTTTGCTATGTAAGGAGCAACAAGTGATGCCTGAAGTAGTTGATTCCTTAGTAGCTGAAATATCTGACATGTTAACCACTGAGGATGGTGATACTTTTAATGAATTACCTAATAACCAATATGATTATGGACTAGGCACAATGCAATCGAGTCCAATGTATGTCCGAATTGTCAGCAAGCAGATGGTAGGAATATATGTATCTATTTGGGTGCAGAGAAGGTTGAGAAGGCACATTAACAATTTGAAAGTTTCTCCTGTTGGAATTGGTCTTATGGGCTACATGGGAAACAAGGGCTCTGTTTCAGTAAGTATGTCTCTCTTTCAGTCACGTTTGTGCTTTGTTTGTTCCCATCTTTCTTCTGGTCAGAAGGATGGACAGAGGCGAAACTCTGATGTTCATGAGATTCTTCGACGCACTTGCTTCTCATCCATCTTCGATCCAGATCAACCACAAACAATCCCATCTCATGATCAGATTTTCTGGTTCGGGGATTTGAATTATCGTGTAAACATGTTGGATGTGGAGGTTCGAAAGTTGGTGTCTCTAAAGAAGTGGGGTGAACTGATGAATAATGATCAGTTAAGCAAAGAATTGAGTGCTGGGCATGTATTTGATGGATGGAAAGAGGGGTTGATAAAATTCCCACCAACTTACAAGTATGAAATTAACTCCGATAGATATGTTGGTGAGATCCCAAAAGAAGGGGAAAAGAAGAGATCTCCAGCCTGGTGCGATCGTATATTATGGCAAGGAAAAGGAATAAAGCAAATTCAGTATGGGCGTGCAGAAATTCAGCTCTCAGATCATCGACCAGTTAGTTCTATCTTCTTGATTGAAGTCGAAGTATTTGACCATCGCAAGCTAAAAAGAGCTCTAAATTTCACTAGTGCAGCAGTACACCCAGATATCTTCCTTGATGAACATGATGAATCATAA 1860 0.4038 MKARRGKGSEAFWPSLVMKKWLNVKPKVNDFSEDEVDPETESEDDASSPKYSRMCEHDDNSLRTQGIQPMFSSKTSDATCKAFKIRHRRGKSETLRAQYINKKEVRVAIGTWNVAGKHPHEDLEIDEWICAEDQADIFILGFQEVVPLSAGNVLGAEDNTPIHKWEAIIRRTLNKSSKPENDGKHKSYSAPPSPALRTSSVADVLADNLDANAIVETIDNYDLEQPEVKNIIGIRKNLHLKRLYSMNLRSKLDWPERSLDAISQIVDSDIKLRRVLSGSDRIRSSWKENALLYSSGLKRSHHSSGNLGLLCKEQQVMPEVVDSLVAEISDMLTTEDGDTFNELPNNQYDYGLGTMQSSPMYVRIVSKQMVGIYVSIWVQRRLRRHINNLKVSPVGIGLMGYMGNKGSVSVSMSLFQSRLCFVCSHLSSGQKDGQRRNSDVHEILRRTCFSSIFDPDQPQTIPSHDQIFWFGDLNYRVNMLDVEVRKLVSLKKWGELMNNDQLSKELSAGHVFDGWKEGLIKFPPTYKYEINSDRYVGEIPKEGEKKRSPAWCDRILWQGKGIKQIQYGRAEIQLSDHRPVSSIFLIEVEVFDHRKLKRALNFTSAAVHPDIFLDEHDES* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0309 619 Gene3D Endonuclease/exonuclease/phosphatase 87 190 IPR036691 -
Lan6g0309 619 MobiDBLite consensus disorder prediction 174 196 - -
Lan6g0309 619 SUPERFAMILY DNase I-like 96 603 IPR036691 -
Lan6g0309 619 SMART i5p_5 295 592 IPR000300 GO:0016791|GO:0046856
Lan6g0309 619 MobiDBLite consensus disorder prediction 28 56 - -
Lan6g0309 619 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 615 - -
Lan6g0309 619 Gene3D Endonuclease/exonuclease/phosphatase 287 610 IPR036691 -
Lan6g0309 619 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 615 IPR045849 GO:0004445|GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0309 Lan-Chr6 2369464 2375366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0309 354 592 Acyl Lipid Metabolism Gene Families AT1G65580 30.961 1.34e-35 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0309 K24221 - ccaj:109800886 954.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0379 17 2814894 2819325 Lan6g0309 6 2369464 2375366 LSH
Lan6g0309 6 2369464 2375366 Lan6g0931 6 8691866 8698141 PCT
Lan6g0931 6 8691866 8698141 Lan6g0309 6 2369464 2375366 PCT