Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0379 ATGAAAGCAAGGAGAGGAAAACGCTCAGAGGGCTTTTGGCCTTCCCTTGTGATGAAAAAATGGTTAAATGTGAAGCCTAAGGTGAATGATTTTAGTGAAGATGAAGTAGATACTGAAACTGAGAGTGAAGATGATGCTTCCTCTCCTAAATATTCAAGAATGCGCGAGTGTGAAGATAATCCACTTAAAACACAAGGAACCCAATCCATATTCTCAAGTCAAACATCAGATGCATCTAGTAAGGGTTACAAGATAAGTCACAGAAGAGGAAAATCAGAAACTCTGCGTGCTCAGTACATAAATACAAAGGAAGTGAGAGTAGCAATTGGCACTTGGAATGTTGCTGGAAAACATCCACATGAGGATCTTGAGATTGATGAGTGGATTTGTGCCGAAGATCAAGCAGATATTTACATTCTTGGTTTCCAAGAGGTAGTTCCACTGAGTGCTGGAAATGTACTGGGAGCAGAGGATAATACACCAATTCATAAATGGGAGGCAATTATTCGAAGAGTTCTAAACAAATCTTCTGAATCGGAAAGTGACAGTAAACACAAAAGCTATAGTGCCCCTCCTTCTCCAGTTTTAAGAACTTCATCTGCTGCGGATGTTCTGGCAGATAACTTAGATGCTAATGCAATAGATATGATCAATGAGGAGTATGTGGAAACCGATGACAATGATTTGTTGGAGCAGCCAGAATTGAAAAACATTAACTGTATAGGGAAGAATTTACAGTTGAATAGAATATATAACTTGGATATTCAGCCTAGACTCGACTGGCCTGAACGTCCATTAGATGCAATCTCCCAAATTGTTGATTCACATCCAAAGTTGCGCAGAGCACTAAGTGGCTCAGACAGAATTGGCTTTAGCTGGAAGGAGAATGCTTTAATATATGGCAGTGGATTGAAACGTTCACACCACAGTTCTGGAAATCTGGGTTTGTTATGTAAAGAGCAGCAAGTAATGCCTAAAGAAGTAGTCGATTCCTTAGTAGCTGAAGTATCTGACATGTTATTTGTTGAGAATGATGTTACTTTTAATGAATTACCTAATGACCAAGATGATTATGGATTAGGCGCGATGAAATTGAGTCCAAGGTATGTCCGAATTGTCAGCAAGCAGATGGTAGGGATATATGTATCTGTTTGGGTGCAGAGAAGGTTGAGAAGGCACATTAATAATTTGAAAGTTTCTCCTGTTGGAATTGGCCTTATGGGCTATATGGGAAATAAGGGGTCAGTTTCGATTAGTTTGTCTCTCTTTCAGTCGCGTCTGTGCTTCGTTTGTTCCCATCTTTCTTCTGGTCAGAAGGATCGGCAGAGGCGAAACTCTGATGTTCATGAAATTCTCCGACGCACTTGCTTCTCATCTGTCTTTGATCCAGATCAACCACAAACAATCTCGTCTCACGATCAGATTTTCTGGTTCGGGGATTTGAATTATCGGATCAACATGTTGGATGTGGAGGTCAGAAAGTTGGTGGCTCTAAAGAAGTGGGATGAACTGATGAATAGTGATCAACTATGCAAAGAAATGCGTCCTGGGCATGTATTTGATGGATGGAAAGAGGGGTTGATAAACTTCCCACCTACTTACAAGTATGAATTTAACTCTGATAGATATATTGGTGAGAACCCGAAAGAAGGGGAAAAGAAGAGATCTCCAGCCTGGTGCGATCGGATATTATGGCAAGGAAAAGGAATAAAGCAACTTGAATATGGGCGTGCAGAAATTAAGCTCTCAGATCATCGACCAGTTAGTTCTATCTTCTCAGTCGAAGTCGAAGTATTTGATCAACGCAAGCTAAAAAGAGCTCTAAATTTCACTAGTGCAGCAGTACACCCAGAGATCTTCCTTGATGAACATGATGAATTATAA 1884 0.4034 MKARRGKRSEGFWPSLVMKKWLNVKPKVNDFSEDEVDTETESEDDASSPKYSRMRECEDNPLKTQGTQSIFSSQTSDASSKGYKISHRRGKSETLRAQYINTKEVRVAIGTWNVAGKHPHEDLEIDEWICAEDQADIYILGFQEVVPLSAGNVLGAEDNTPIHKWEAIIRRVLNKSSESESDSKHKSYSAPPSPVLRTSSAADVLADNLDANAIDMINEEYVETDDNDLLEQPELKNINCIGKNLQLNRIYNLDIQPRLDWPERPLDAISQIVDSHPKLRRALSGSDRIGFSWKENALIYGSGLKRSHHSSGNLGLLCKEQQVMPKEVVDSLVAEVSDMLFVENDVTFNELPNDQDDYGLGAMKLSPRYVRIVSKQMVGIYVSVWVQRRLRRHINNLKVSPVGIGLMGYMGNKGSVSISLSLFQSRLCFVCSHLSSGQKDRQRRNSDVHEILRRTCFSSVFDPDQPQTISSHDQIFWFGDLNYRINMLDVEVRKLVALKKWDELMNSDQLCKEMRPGHVFDGWKEGLINFPPTYKYEFNSDRYIGENPKEGEKKRSPAWCDRILWQGKGIKQLEYGRAEIKLSDHRPVSSIFSVEVEVFDQRKLKRALNFTSAAVHPEIFLDEHDEL* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0379 627 SUPERFAMILY DNase I-like 96 612 IPR036691 -
Lan17g0379 627 SMART i5p_5 326 600 IPR000300 GO:0016791|GO:0046856
Lan17g0379 627 MobiDBLite consensus disorder prediction 28 87 - -
Lan17g0379 627 MobiDBLite consensus disorder prediction 61 81 - -
Lan17g0379 627 Gene3D Endonuclease/exonuclease/phosphatase 87 190 IPR036691 -
Lan17g0379 627 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 8 623 IPR045849 GO:0004445|GO:0046855
Lan17g0379 627 MobiDBLite consensus disorder prediction 43 60 - -
Lan17g0379 627 Gene3D Endonuclease/exonuclease/phosphatase 318 619 IPR036691 -
Lan17g0379 627 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 8 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0379 Lan-Chr17 2814894 2819325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0379 369 601 Acyl Lipid Metabolism Gene Families AT1G65580 31.522 2.81e-37 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0379 K24221 - ccaj:109800886 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0379 17 2814894 2819325 Lan6g0309 6 2369464 2375366 LSH
Lan17g0379 17 2814894 2819325 Lan6g0931 6 8691866 8698141 PCT
Lan6g0931 6 8691866 8698141 Lan17g0379 17 2814894 2819325 PCT