Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0103 ATGAACAACTTCAAGTTAGGGGTAGATGTGGTTAGTGCTCACAATCTACTACCTAAAGATGGAGAAGGTTCATCAAGTTCCTTTGTGGAACTTTACTTTGATGGCCAGAAGTACCGTACGACTATTAAAGAAAAGGATCTCAACCCTGTTTGGAATGAGAGCTTCTACTTCAATATATCTGATCCTTCTAATCTTCACTATCTCACTCTTGATGCTTATGTACACTGCCATACCAGAGCTACTAACTCAAGTTCATTTCTTGGCAAGGTTAGCCTCACTGGGACTTCTTTTGTCCCTTACTCTGATGCTGTTGTTCTGCACTACCCATTAGAAAAGCGTGGTATTTTCTCTCGAGTGAGAGGAGAGATTGGCCTTAAAGTTTACATCACTGATGACTCAACCATAAAATCCTCAATTCCAGCCCCTGTTGTTGAGTCCATGCCAACAAATAATCCCAGCTTAGCACACACAGAAGTTAATGCAGCTGGAAATGCAATGGCAAACCCTTTGTCCAATGCAAAGGTTGAGTCGGCAAGACACACATTTCATCATCTCCCTAACCAAAACCAAAACCAGCACCAGCACCAGCAACATTCCACTGGCTTTACAGATACCCACTATGTAACAAAGTACGAAGCTGATCAAATGGTATCTGGTGGACCACAACCTATGAAGCTAGTACACATGCATTCTCTTTCATCAGTGCAGCCGGTTGATTATGCACTTAAAGAAACAAGTCCGTTTCTCGGTGGTGGAAGAGTTGTGGGGGGTCGTATTATTCATAAAGACAAGGCCTCAAGTACATATGATCTTGTGGAAAGGATGTATTTTCTGTATGTCAGGGTTGTTAAGGCTCGTGAACTTCCTGCAATGGATCTTACCGGGAGTCTTGATCCATTTGTTGAGGTGAGAATTGGAAACTACAAAGGTATTACTCGACACTTTGATAAGAATCAGCATCCGGAGTGGAATCAAGTGTTTGCATTTTCAAAGGAGAGGATGCAAGCATCTATACTAGAAGTTAGGATCAAGGACAAGGATCTTGTCAAAGATGACTTTGTAGGCCTTGTGAGGTTTGACATCAATGAAGTTCCTTTGAGAGTACCACCAGATAGTCCTTTAGCGCCAGAGTGGTACCGGCTCGAGGATAAGAAAGGTGAGAAGATTAAAGGTGAGGTGATGCTTGCTGTATGGATTGGTACACAGGCAGATGAGGCTTTTTCTGATGCGTGGCATTCGGATGCAGCTACACCTGTTGACAGCACACCGGCTGCAACCACAGTGATTCGTTCGAAGGTCTATCATGCACCAAGGTTGTGGTATGTGCGTGTTAACATTGTAGAGGCACAAGACTTGATTCCTACGGATAGAAACCGTTTTCCAGATGTGTATGTGAAGGCGCAGATAGGGAACCAAGTGCTGAAAACAAAGACAGTTCCAGCCAGGTCTCTTAGCCCTCTCTGGAACGAGGACCTTTTGTTCGTTGCTGCTGAACCTTTTGAAGACCATCTAGTCCTATCAGTTGAAGATAGGATTGGTGCTGGAAAAGATGAGATCATTGGGAGGGTCATCATACCACTCAACGCTATGGAGAGGCGTGCTGATGACAGAATGATTCATTCTAGATGGTTCAACCTTGAAAAGCCGGTTGCTGTTGATGTTGATCAGTTGAAGAAAGATAAGTTCTCTAGCCGAATTCACCTACGGCTATGTCTTGATGGTGGATATCATGTTCTCGATGAATCAACTCATTACAGCAGCGATCTTCGTCCAACAGCAAAACAGCTATGGAGACCTCCAATTGGGATTCTAGAGCTTGGAGTCCTGAAAGCTGTAGGACTCCACCCTATGAAAACAAGGGAAGGAAGGGGCACTTCTGATACATACTGTGTAGCAAAATATGGTCATAAATGGATCAGAACAAGGACTATTGTTGATAATCTGTGTCCAAAATACAATGAGCAATACACTTGGGAAGTTTTTGATCAGGCCACTGTCCTAACAGTGGGTGTCTTTGACAACAGCCACATTGGAGAAAAGGGTTCAAAAGACTTGAAAATTGGCAAAGTTAGAATTCGTATCTCAACATTGGAAACAGAAAGAATTTACACTCACTCCTATCCGTTGCTTGTTCTTCACCCAACCGGGGTTAAGAAGATGGGGGAACTTCACTTGGCAATAAGATTTTCATGCACTTCATTTGCAAATATGCTTTACCTATACTCAAAACCACTGCTTCCAAAAATGCACTACGTTCGGCCCTTCTCAGTGATGCAGCTTGACATGCTGCGCCACCAAGCGGTGAACATAGTGGCTGCACGACTAGGCCGAGCAGAGCCACCACTTCGCAAGGAAGTGGTGGAATACATGTCTGATGTGGACTCACACCTGTGGAGCATGCGGCGAAGCAAGGCGAATTTCTTTCGTCTGATGACACTCTTCTCAGGCGTATTTGCAGTTGGGAAATGGTTTGGTGATATCTGCATGTGGAGGAATCCTATTACAACAGTGCTGGTTCATGTGTTATTCCTTATGCTAGTGTGCTTCCCTGAACTCATTCTACCTACAGTTTTTCTCTACATGTTTTTGATAGGTGTATGGAACTTCAGGTACAGACCAAGATACCCTCCTCACATGAACACAAGAATATCACAAGCTGATGCAGTGCAACCAGATGAGTTGGATGAGGAGTTTGACACATTCCCTACTAGCCGAAACCCGGACATAGTTCGAATGAGGTATGATCGGTTAAGGAGTGTGGCTGGAAGAATTCAAACAGTGATTGGTGACTTGGCGAGCCAAGGAGAAAGGATTCAAGCGCTGTTAAGTTGGAGAGACCCGCGTGCTACAGCACTATTCATTACATTATGTCTTGTATCTGCTTTGGTTCTTTATGTTACTCCTTTTCAAGCACTTGCAGGCTTGACAGGGTTCTATGTTATGAGGCATCCGAGGTTTCGCCATAGGCTACCCTCTGCACCAATCAATTTCTTCCGTCGCCTCCCTGCCAAAACAGACAGTATGTTATAG 3030 0.4416 MNNFKLGVDVVSAHNLLPKDGEGSSSSFVELYFDGQKYRTTIKEKDLNPVWNESFYFNISDPSNLHYLTLDAYVHCHTRATNSSSFLGKVSLTGTSFVPYSDAVVLHYPLEKRGIFSRVRGEIGLKVYITDDSTIKSSIPAPVVESMPTNNPSLAHTEVNAAGNAMANPLSNAKVESARHTFHHLPNQNQNQHQHQQHSTGFTDTHYVTKYEADQMVSGGPQPMKLVHMHSLSSVQPVDYALKETSPFLGGGRVVGGRIIHKDKASSTYDLVERMYFLYVRVVKARELPAMDLTGSLDPFVEVRIGNYKGITRHFDKNQHPEWNQVFAFSKERMQASILEVRIKDKDLVKDDFVGLVRFDINEVPLRVPPDSPLAPEWYRLEDKKGEKIKGEVMLAVWIGTQADEAFSDAWHSDAATPVDSTPAATTVIRSKVYHAPRLWYVRVNIVEAQDLIPTDRNRFPDVYVKAQIGNQVLKTKTVPARSLSPLWNEDLLFVAAEPFEDHLVLSVEDRIGAGKDEIIGRVIIPLNAMERRADDRMIHSRWFNLEKPVAVDVDQLKKDKFSSRIHLRLCLDGGYHVLDESTHYSSDLRPTAKQLWRPPIGILELGVLKAVGLHPMKTREGRGTSDTYCVAKYGHKWIRTRTIVDNLCPKYNEQYTWEVFDQATVLTVGVFDNSHIGEKGSKDLKIGKVRIRISTLETERIYTHSYPLLVLHPTGVKKMGELHLAIRFSCTSFANMLYLYSKPLLPKMHYVRPFSVMQLDMLRHQAVNIVAARLGRAEPPLRKEVVEYMSDVDSHLWSMRRSKANFFRLMTLFSGVFAVGKWFGDICMWRNPITTVLVHVLFLMLVCFPELILPTVFLYMFLIGVWNFRYRPRYPPHMNTRISQADAVQPDELDEEFDTFPTSRNPDIVRMRYDRLRSVAGRIQTVIGDLASQGERIQALLSWRDPRATALFITLCLVSALVLYVTPFQALAGLTGFYVMRHPRFRHRLPSAPINFFRRLPAKTDSML* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0103 1009 CDD C2A_MCTP_PRT_plant 5 131 - -
Lan6g0103 1009 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Lan6g0103 1009 CDD C2D_MCTP_PRT_plant 603 726 - -
Lan6g0103 1009 ProSiteProfiles C2 domain profile. 585 707 IPR000008 -
Lan6g0103 1009 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 602 741 IPR035892 -
Lan6g0103 1009 Pfam Plant phosphoribosyltransferase C-terminal 854 1009 IPR013583 -
Lan6g0103 1009 Gene3D C2 domain 599 733 IPR035892 -
Lan6g0103 1009 CDD C2B_MCTP_PRT_plant 277 401 - -
Lan6g0103 1009 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 142 IPR035892 -
Lan6g0103 1009 CDD C2C_MCTP_PRT_plant 441 591 - -
Lan6g0103 1009 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 4 1009 - -
Lan6g0103 1009 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 276 415 IPR035892 -
Lan6g0103 1009 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 440 593 IPR035892 -
Lan6g0103 1009 Pfam C2 domain 5 93 IPR000008 -
Lan6g0103 1009 Pfam C2 domain 278 372 IPR000008 -
Lan6g0103 1009 Pfam C2 domain 602 709 IPR000008 -
Lan6g0103 1009 Pfam C2 domain 440 546 IPR000008 -
Lan6g0103 1009 SMART C2_3c 603 706 IPR000008 -
Lan6g0103 1009 SMART C2_3c 5 106 IPR000008 -
Lan6g0103 1009 SMART C2_3c 441 539 IPR000008 -
Lan6g0103 1009 SMART C2_3c 277 373 IPR000008 -
Lan6g0103 1009 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 4 1009 - -
Lan6g0103 1009 Gene3D C2 domain 1 130 IPR035892 -
Lan6g0103 1009 ProSiteProfiles C2 domain profile. 423 544 IPR000008 -
Lan6g0103 1009 Gene3D C2 domain 423 572 IPR035892 -
Lan6g0103 1009 Gene3D C2 domain 259 399 IPR035892 -
Lan6g0103 1009 ProSiteProfiles C2 domain profile. 259 379 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0103 Lan-Chr6 687485 696914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0103 179 1009 Lipid Metabolism Gene Families AT4G11610 78.698 0.0 1418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0103 - - gmx:100777951 1830.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1106 18 16106126 16109886 Lan6g0103 6 687485 696914 LSH