Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1106 ATGATGAACAAGTTCAAGTTAGGGGTAGATGTGGTTAGTGCTCACAATCTACTACCTAAAGATGGAGAGGGTTCATCAAGTTCCTTTGTGGAACTTTACTTTGATGGCCAGAAGTACCGTACCACTATTAAAGAAAGAGACCTCAACCCTGTTTGGAATGAGAGCTTCTACTTCAATATATCTGATCCTTCTAATCTTAACCATCTCACTCTTGATGCTTATGTCCATTGCCATACCAGAGCTACTAACTCCAGTTCATTTCTTGGCAAGGTTAGCCTCACGGGGACTTCTTTTGTCGCTTACGCTGATGCTGTTGTCCTGCACTATCCATTGGAAAAGCGTCGAATTTTCTCTCGTGTTAGAGGAGAGATTGGCCTTAAAGTTTACATTACTAATGACTCAACCATAAAATCTTCAATTCCAACTCCTGCTGTTGAGTCCATGCACACAAATAATCCTAGCTTAGCCGACACACAAGTTAATGCAGCTGGAAACACAATGGCCAACCCTTTGTCTAATGGAAAGGTTGAGTCGGCAAGGCACACGTTTCATCATCTCCCTAACCCAAACCATCAGCATCACCAACACCATTCCAATGGATTTGGAGATACCCATTATGTAACAAAGTACGAAGCTGATGAAATGGTATCCGGTGGACCACAACCTATGAAGCTAGTACACATGCATTCTGTTTCATCAGCGCAACCAGTTGATTATGCACTTAAAGAAACAAGTCCATTTCTCGGTGGTGGAAGAGTTGTAGGAGGTCGTATTATTCATAAAGACAAGACCTCAAGTACATATGACCTTGTGGAAAGGATGTATTTTCTGTATGTCAGGGTTGTTAAGGCTCGTGAACTTCCTGCTATGGATCTTACTGGGAGTCTTGATCCATTTGTTGTGGTGAGGATCGGAAACTACAAAGGTATTACTCGACACTTTGATAAGAACCAGCATCCGGAGTGGAATCAAGTGTTTGCATTTTCAAAGGAGAGGATGCAAGCATCTATACTAGAAGTTAGGATCAAGGACAAGGATCTTGTCAAAGATGATTTTGTAGGCCTTGTGAGGTTTGATATCAATGAAGTTCCTTTGAGAGTACCACCAGATAGTCCTTTGGCACCAGAGTGGTACCGGCTCGAGGATAAAAAAGGGGAGAAGATAAAAGGCGAGCTGATGCTTGCTGTATGGATAGGTACACAAGCAGATGAGGCTTTTTCAGATGCATGGCATTCAGATGCAGCTACACCTGTTGACAGCACACCTGCTGCAACCACAGTGATTCGTTCGAAGGTCTATCATGCACCAAGGTTGTGGTATGTGCGTGTTAACATCGTAGAGGCACAAGATTTGGTTCCTACGGAGAAAAATCGTTTTCCTGATGTGTATGTGAAAGCGCAGATAGGAAACCAAGTGCTGAAAACAAAGACAGTTCCAGCCAGAACTCTTAGCCCTCTCTGGAATGAGGACCTTTTGTTTGTTGCAGCTGAACCTTTTGAAGATCATCTTGTCCTTTCAGTTGAAGATAGGATTGGTTCTGGTAAAGATGAGATCATTGGGAGGGTCATCATACCACTCAATGCGGTGGAGAGGCGTGCTGACGATAGAATGATTCATTCTAGATGGTTTAACCTGGAAAAGCCGGTTGCTGTTGATGTTGATCAATTGAAGAAAGAAAAGTTCTCTAGCAGAATTCACCTTCATCTATGTTTAGATGGTGGATATCATGTTCTTGATGAATCAACACATTACAGCAGTGATCTTCGTCCCACGGCAAAGCAGCTTTGGAGGCCACCAATTGGGATTCTAGAACTAGGAGTGCTGAAAGCTGTAGGTCTTCACCCTATGAAAACAAGGGAAGGAAGAGGCGCATCTGATACATACTGTGTAGCAAAATATGGTCATAAGTGGATAAGAACAAGGACCATTGTTGATAATCTGTCTCCAAAATTCAATGAGCAATACACTTGGGAGGTTTTTGATCAGGCCACTGTCATTACAGTAGGTGTCTTTGACAACAGCCATATAGGGGAAAAGGGTTCAAAGGACTTGAAAATCGGCAAGGTCAGAATTCGTATCTCGACATTGGAAACAGGAAGGATTTACACTCACTCCTATCCATTGCTAGTTCTTCACCCAACTGGGGTTAAGAAGATGGGAGAGCTTCACTTGGCAATAAGGTTTTCATGCACTTCTTTTGCAAACATGCTATACCTATACTCAAAACCACTACTGCCGAAAATGCACTACGTTAGGCCCTTCTCAGTCATGCAGGTTGACATGCTGCGCCACCAAGCGGTGAACATAGTGGCTGCACGACTAGGACGAGCAGAGCCACCACTTCGCAAGGAAGTGGTGGAATACATGTCTGATGTGGACTCACACCTGTGGAGCATGCGGCGAAGCAAGGCGAATTTCTTCCGGTTGATGACACTCTTCTCAGGCGTATTCGCAGTTGGCAAGTGGTTTGGTGATATCTGCATGTGGAGGAATCCTATTACGACAGTGCTGGTTCATGTGCTGTTCCTTATGCTAGTCTGCTTCCCTGAACTAATTCTGCCTACAGTTTTTCTCTACATGTTTTTGATAGGTGTGTGGAACTTCAGGTACCGGGCAAGGTATCCTCCTCACATGAATACAAGACTATCACAAGCAGATGCAGTGCAGCCAGATGAGTTAGATGAGGAGTTTGACACATTCCCTACTAGCCGAAACCCGGACATTGTAAGAATGAGGTACGATCGGTTAAGGAGTGTAGCTGGAAGAATCCAAACGGTGGTTGGTGATTTGGCGAGCCAAGGGGAAAGGATTCAAGCACTGTTAAGCTGGAGAGACCCACGTGCCACGGCACTCTTCATTACATTATGTCTTGTATCTGCATTGGTTCTTTATGTTACTCCTTTTCAAGCACTTGCAGGTTTGGTAGGGTTCTATGTCATGAGGCATCCGAGATTTCGCCACAGGCTCCCTTCTGCGCCGATCAATTTCTTCCGTCGCTTGCCTGCAAAAACAGATAGTATGTTGTAG 3027 0.4424 MMNKFKLGVDVVSAHNLLPKDGEGSSSSFVELYFDGQKYRTTIKERDLNPVWNESFYFNISDPSNLNHLTLDAYVHCHTRATNSSSFLGKVSLTGTSFVAYADAVVLHYPLEKRRIFSRVRGEIGLKVYITNDSTIKSSIPTPAVESMHTNNPSLADTQVNAAGNTMANPLSNGKVESARHTFHHLPNPNHQHHQHHSNGFGDTHYVTKYEADEMVSGGPQPMKLVHMHSVSSAQPVDYALKETSPFLGGGRVVGGRIIHKDKTSSTYDLVERMYFLYVRVVKARELPAMDLTGSLDPFVVVRIGNYKGITRHFDKNQHPEWNQVFAFSKERMQASILEVRIKDKDLVKDDFVGLVRFDINEVPLRVPPDSPLAPEWYRLEDKKGEKIKGELMLAVWIGTQADEAFSDAWHSDAATPVDSTPAATTVIRSKVYHAPRLWYVRVNIVEAQDLVPTEKNRFPDVYVKAQIGNQVLKTKTVPARTLSPLWNEDLLFVAAEPFEDHLVLSVEDRIGSGKDEIIGRVIIPLNAVERRADDRMIHSRWFNLEKPVAVDVDQLKKEKFSSRIHLHLCLDGGYHVLDESTHYSSDLRPTAKQLWRPPIGILELGVLKAVGLHPMKTREGRGASDTYCVAKYGHKWIRTRTIVDNLSPKFNEQYTWEVFDQATVITVGVFDNSHIGEKGSKDLKIGKVRIRISTLETGRIYTHSYPLLVLHPTGVKKMGELHLAIRFSCTSFANMLYLYSKPLLPKMHYVRPFSVMQVDMLRHQAVNIVAARLGRAEPPLRKEVVEYMSDVDSHLWSMRRSKANFFRLMTLFSGVFAVGKWFGDICMWRNPITTVLVHVLFLMLVCFPELILPTVFLYMFLIGVWNFRYRARYPPHMNTRLSQADAVQPDELDEEFDTFPTSRNPDIVRMRYDRLRSVAGRIQTVVGDLASQGERIQALLSWRDPRATALFITLCLVSALVLYVTPFQALAGLVGFYVMRHPRFRHRLPSAPINFFRRLPAKTDSML* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1106 1008 ProSiteProfiles C2 domain profile. 422 543 IPR000008 -
Lan18g1106 1008 Pfam C2 domain 277 371 IPR000008 -
Lan18g1106 1008 Pfam C2 domain 601 708 IPR000008 -
Lan18g1106 1008 Pfam C2 domain 6 94 IPR000008 -
Lan18g1106 1008 Pfam C2 domain 439 545 IPR000008 -
Lan18g1106 1008 Gene3D C2 domain 598 732 IPR035892 -
Lan18g1106 1008 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 5 1008 - -
Lan18g1106 1008 SMART C2_3c 276 372 IPR000008 -
Lan18g1106 1008 SMART C2_3c 440 538 IPR000008 -
Lan18g1106 1008 SMART C2_3c 6 107 IPR000008 -
Lan18g1106 1008 SMART C2_3c 602 705 IPR000008 -
Lan18g1106 1008 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 5 1008 - -
Lan18g1106 1008 CDD C2D_MCTP_PRT_plant 602 725 - -
Lan18g1106 1008 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 275 414 IPR035892 -
Lan18g1106 1008 CDD C2B_MCTP_PRT_plant 276 400 - -
Lan18g1106 1008 Gene3D C2 domain 258 398 IPR035892 -
Lan18g1106 1008 Gene3D C2 domain 422 571 IPR035892 -
Lan18g1106 1008 CDD C2C_MCTP_PRT_plant 440 590 - -
Lan18g1106 1008 Pfam Plant phosphoribosyltransferase C-terminal 853 1008 IPR013583 -
Lan18g1106 1008 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 439 592 IPR035892 -
Lan18g1106 1008 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 601 740 IPR035892 -
Lan18g1106 1008 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 139 IPR035892 -
Lan18g1106 1008 CDD C2A_MCTP_PRT_plant 6 131 - -
Lan18g1106 1008 Gene3D C2 domain 1 131 IPR035892 -
Lan18g1106 1008 ProSiteProfiles C2 domain profile. 258 378 IPR000008 -
Lan18g1106 1008 ProSiteProfiles C2 domain profile. 584 706 IPR000008 -
Lan18g1106 1008 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1106 Lan-Chr18 16106126 16109886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1106 180 1008 Lipid Metabolism Gene Families AT4G11610 77.988 0.0 1410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1106 - - gmx:100777951 1790.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1106 18 16106126 16109886 Lan18g1106 18 16106126 16109886 ECH
Lan18g1106 18 16106126 16109886 Lan6g0103 6 687485 696914 LSH