Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0076 ATGGATGGTTCATTTGACGATGAAGCTGAACCATCTGTTGTTACAATCAAAGAGTATCTTGATGAAGTCGAGGAACGAGAACTGGCAGCTGATTTAGTTTTGGGGGGTGATGATGGCAAGGAATGTACCTACAGCAAAGGATACATGAAAAGGCAGGCAATTTTTTCCTGCCTCACCTGCACCCCAGATGGGAATGCTGGAGTTTGCACTGCTTGCTCATTGTCTTGCCATGATGGCCATGAGATCGTGGAACTATGGACAAAAAGGAACTTCAGGTGTGATTGTGGCAATTCAAAGTTTGGTGAATTCTACTGTAAGCTTTTCGCAGGCAAAGATGCAGAGAATATTGAGAACTCATACAATCATAACTTTAAAGGTTTGTATTGCACATGTGGTCGCCCTTACCCAGACCCAGATGCTGAAGAACAAGTAGAGATGATACAGTGTTGTCTATGTGAGGACTGGTTCCATGAGGAGCATCTTGGTCTTGAGTCTTCTGATGAGATTCCCAGAGATGATGAAGGAGAACCTCTGTATGAGGATTTCATCTGTAAGGCTTGCTCTGAAGTGTGTTTCTTTCTAAAGTTATATCCTGAAGTGATATGGGCTTCAGGAAAGCAGCCTGATGCTACTGTCGAAGTTAGCAAGAATAAAGGTGTTTTGGAAGATATGCCTCCAGTGGGCGATGCTTCTTCTTCTTCTTCACATAATTCTCCTAAAACTGATGATGCAAAAGCTATTATTTCTGAATCTATCTCTGGTGGCAAGGATATGCTTCAGGGAGGAAATTGTGATAGCAGTAAGGATTTAAGCCAATGCACAAGCAGCACCAATATGCATGTTAACTGTCTCCTTGGTGTTAACATTGTTGCTGCTTCCCCAGTTTTAAATAGTAAACCAATGTTCCTTTCTAAAAATTGGAGAGATACTCTATGCAAATGTAACAATTGTGTGGAGTTTTACAAACTGAAGCGGATTGCTTTTCTACTTGACAAGGAAGACTCAATTGCGGAATATGAGAGGATGGCCAAGCAAAAGAGAGAAGAAAAGTTGCAGGAAGCAGAGGGTGCTGAGGTAAACTTTTTTAATAAGCTTGGACACGTAGAGAAAGTGGAGATTTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTACTTTCCTGGAATCTGCAGATTCTTCAAAGCCAATTACCGAGGCTGATGTCCACCAGTTTTTTGACGACATCAAGAAAAAGCGTCGCCGTTTACAGTGA 1254 0.4203 MDGSFDDEAEPSVVTIKEYLDEVEERELAADLVLGGDDGKECTYSKGYMKRQAIFSCLTCTPDGNAGVCTACSLSCHDGHEIVELWTKRNFRCDCGNSKFGEFYCKLFAGKDAENIENSYNHNFKGLYCTCGRPYPDPDAEEQVEMIQCCLCEDWFHEEHLGLESSDEIPRDDEGEPLYEDFICKACSEVCFFLKLYPEVIWASGKQPDATVEVSKNKGVLEDMPPVGDASSSSSHNSPKTDDAKAIISESISGGKDMLQGGNCDSSKDLSQCTSSTNMHVNCLLGVNIVAASPVLNSKPMFLSKNWRDTLCKCNNCVEFYKLKRIAFLLDKEDSIAEYERMAKQKREEKLQEAEGAEVNFFNKLGHVEKVEILKGIEEMKDGLRTFLESADSSKPITEADVHQFFDDIKKKRRRLQ* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0076 417 SMART PHD_3 128 188 IPR001965 -
Lan6g0076 417 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UBR7 6 416 IPR040204 GO:0008270|GO:0061630
Lan6g0076 417 Coils Coil 329 349 - -
Lan6g0076 417 MobiDBLite consensus disorder prediction 218 243 - -
Lan6g0076 417 Pfam Putative zinc finger in N-recognin (UBR box) 42 106 IPR003126 GO:0008270
Lan6g0076 417 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UBR7-RELATED 6 416 - -
Lan6g0076 417 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 123 190 IPR013083 -
Lan6g0076 417 SUPERFAMILY FYVE/PHD zinc finger 115 197 IPR011011 -
Lan6g0076 417 MobiDBLite consensus disorder prediction 228 243 - -
Lan6g0076 417 ProSiteProfiles Zinc finger UBR-type profile. 40 110 IPR003126 GO:0008270
Lan6g0076 417 SMART push_1 40 109 IPR003126 GO:0008270
Lan6g0076 417 CDD PHD_UBR7 128 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0076 Lan-Chr6 513642 519021 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0076 K11979 - gmx:100817441 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1123 18 16194919 16201413 Lan6g0076 6 513642 519021 LSH