Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0051 ATGTCGAAACATTTCAAGGGTAGCCGATCATCTCTATCGACAATGTCTGATGCATCTGAAGGCCAAAAGCCTCCTTTACCACCAAATGTAACATTTGCCCGGAGAACGTCATCTGGTCGCTATGTCAGTTACTCTAGGGATGATCTTGACAGCGAGTTAGGGAGTAGTGACTTCATGAATTACACAGTTCATATACCACCAACCCCTGATAACCAACCTATGGATCTGTCGATCTCACAGAAAGTTGAGGAGCAATATGTGTCAAATTCACTCTTCACAGGTGGATTCAACAGTGTTACTCGAGCGCATCTGATGGATAAGGTGATAGAATCTGAGGCAAACCATCCACAGATGGCTGGTGCGAAAGGATCTTCGTGTGCGATTCCCGGATGTGATTCTAAGGTGATGAGTGATGAACGTGGCGTGGACATTCTTCCATGTGAGTGTGATTTTAAGATATGTAGAGATTGTTACATAGATGCAATAAAAACAGGAGGTGGGATATGCCCGGGATGCAAGGAGCAATATAAGAACACCGAACTAGATGAAGTGGCTGTGGATGATGTGCATCCCCTTTCACTTCCTCCACCAAGTGGAATGTCTAAAATGGAGAGGAGATTGTCTAAGATGAAGTCGGCTAATAAATCGGCATTAGTGAGGAGCCAAACCGGAGACTTTGATCATAATAGGTGGCTTTTTGAAACAAAGGGTACCTATGGCTATGGCAATGCTCTATGGCCAAAGGAAGGAGGTTTGGGAAATGGAAAGGGGGAAGAAGTTGGTGAGCCAACTGAGTTTATGAACAGGCCCTGGAGGCCCCTTACACGGAAGCTGAAGATACCTGCAGCTATTCTGAGCCCATATCGGCTTGTTATTTTTATTCGGTTGATTGTACTTGGACTGTTCCTGGCATGGAGGGTCAAGCACAAAAATAGTGATGCAATCTGGCTGTGGGGCATGTCTGTGGTTTGTGAGATCTGGTTTGCTTTTTCCTGGATTTTGGATCAACTTCCGAAACTATGCCCAGTGAACCGTTCCACCGATCTTAATATTCTGAAGGAGAAATTTGAAACACCAACTCTTAGCAATCCTACTGGAAAGTCTGATCTTCCAGGCATAGATATCTTTGTGTCGACGGCTGATCCTGAGAAAGAGCCACCTCTTGTCACTGCCAACACTATCTTGTCTATTTTAGCTGCTGATTACCCAGTTGAGAAGCTGTCTTGCTATGTTTCTGATGACGGAGGTGCGCTTCTAACTTTTGAGGCAATGGCTGAAGCTGCCAGCTTTGCTAATGAGTGGGTTCCCTTCTGCCGTAAACATGATATAGAGCCGAGGAATCCTGATTCATATTTCAACTTAAAGAGAGACCCTTATAAAAACAAAGTGAAGCCTGATTTTGTCAAAGATCGTAGACGGTTGAAACGTGAGTATGACGAGTTCAAGGTCAGGATTAATAGTCTGCCCGACTCTATCCGTCGCCGGTCGGATGCCTATCATGCAAGAGAGGAAATCAAGGCCATGAAACTTCAGAGACAAACCAGGGGAGATGAACCTATAGAAACTGTAAAGATTCCCAAAGCAACATGGATGGTTGATGGAACTCATTGGCCAGGGACTTGGTTAAGTCCTACATCTGAGCACTCCAAGGGTGACCACGCTGGTATAATTCAGGTGATGTTGAAACCTCCAAGCGACGAACCTCTTCTCGGGGGTTCTGATGAGGCAAAGCTTATCGACCTGACTGATATTGATATCCGTCTTCCCCTCCTTGTTTATGTTTCTCGGGAGAAGCGTCCAGGGTATGATCATAACAAAAAAGCGGGGGCCATGAATGCCTTGGTCCGCGCCTCTGCTATAATGTCTAATGGTCCTTTTATACTCAATCTTGACTGTGATCACTATATCTACAACTCAAAGGCAATGAGGGAAGGCATGTGCTTTATGATGGATCGTGGAGGCGACCGCCTATGTTATGTCCAGTTCCCCCAGAGGTTTGAGGGGATTGATCCCTCTGATAGATATGCTAATCATAACACCGTCTTCTTCGATGTCAATATGAGAGCCCTTGATGGACTTCAAGGGCCAGTCTATGTGGGAACCGGTTGCCTTTTTAGAAGGGTTGCGCTTTATGGTTTTGACCCTCCTCGCTCTAAAGAGCACAACCCAGGTTTCTGTTCTTGCTGCTTTGGTCGTAAGAAGAGGCATGTATCATTAGCAAGCACCCATGAAGAGAATCCGGCACTAAGGATGGGTGATGATGATGATGGAGAAGTAATGAACCTATCATCGTTCCCAAAGAAGTTTGGAAACTCAAATTTCCTCATTGACTCAATCCCGGTGGCAGAGTTCCAGGGCCGACCACTTGCTGATCACCCTGCGGTGAAAAATGGACGACCGCCTGGTGCTCTGACCATACCCCGCGATCTTCTCGATGCATCAACCGTAGCAGAAGCCATCAGTGTCATCTCCTGTTGGTATGAGGATAAGACTGAGTGGGGACAGCGTGTTGGATGGATCTATGGATCAGTCACTGAGGACGTGGTCACCGGATATAGGATGCACAATAGAGGTTGGAAATCTGTTTACTGTGTGACAAAGCGTGACGCCTTCCGTGGAACTGCTCCTATCAATCTCACTGACAGGTTACATCAGGTTCTTCGATGGGCTACAGGCTCAGTTGAAATATTCTTCTCTCGGAACAATGCCCTTCTGGCTAGCCCGAGAATGAAACTTCTTCAAAGAATTGCATACCTCAATGTTGGAATCTACCCCTTCACTTCCATCTTTCTTATTGTATACTGCTTCCTTCCTGCACTGTCACTCTTCTCTGGCCAATTCATAGTTCAAACGCTCAATGTCACATTTCTCTCGTATCTCTTAGGCATCACAGTCACTCTGTGCATACTTGCAGTGCTTGAAATCAAGTGGTCTGGCATCGAGCTAGAAGAATGGTGGAGAAATGAGCAGTTTTGGTTGATTGGAGGGACAAGCGCTCATCTAGCTGCGGTGCTTCAAGGTTTGCTCAAAGTCGTAGCTGGTATCGAAATCTCATTCACCTTGACTTCAAAATCCGGTGGAGATGATGTAGATGACGAGTTTGCCGATCTATATATTGTAAAATGGACATCACTTATGATACCACCAATCACAATCATGATGGTGAACTTGATAGCAATAGCAGTCGGAGTTAGCAGAACCATATACAGTGTTATACCACAGTGGAGCCGTTTACTAGGTGGAGTCTTCTTCAGTTTTTGGGTATTGACTCATCTCTATCCTTTTGCAAAAGGTTTGATGGGAAGAAGAGGAAGGACACCTACCATTGTTTTTGTATGGTCAGGTCTCATCGCGATTACAATCTCGCTTCTCTGGGTAGCAATCAATCCTCCTGCTGGTACTAACCAAATTGGTGGTTCCTTTCAGTTCCCGTGA 3435 0.4562 MSKHFKGSRSSLSTMSDASEGQKPPLPPNVTFARRTSSGRYVSYSRDDLDSELGSSDFMNYTVHIPPTPDNQPMDLSISQKVEEQYVSNSLFTGGFNSVTRAHLMDKVIESEANHPQMAGAKGSSCAIPGCDSKVMSDERGVDILPCECDFKICRDCYIDAIKTGGGICPGCKEQYKNTELDEVAVDDVHPLSLPPPSGMSKMERRLSKMKSANKSALVRSQTGDFDHNRWLFETKGTYGYGNALWPKEGGLGNGKGEEVGEPTEFMNRPWRPLTRKLKIPAAILSPYRLVIFIRLIVLGLFLAWRVKHKNSDAIWLWGMSVVCEIWFAFSWILDQLPKLCPVNRSTDLNILKEKFETPTLSNPTGKSDLPGIDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANEWVPFCRKHDIEPRNPDSYFNLKRDPYKNKVKPDFVKDRRRLKREYDEFKVRINSLPDSIRRRSDAYHAREEIKAMKLQRQTRGDEPIETVKIPKATWMVDGTHWPGTWLSPTSEHSKGDHAGIIQVMLKPPSDEPLLGGSDEAKLIDLTDIDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSKAMREGMCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRVALYGFDPPRSKEHNPGFCSCCFGRKKRHVSLASTHEENPALRMGDDDDGEVMNLSSFPKKFGNSNFLIDSIPVAEFQGRPLADHPAVKNGRPPGALTIPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKLLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLSYLLGITVTLCILAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVVAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGVSRTIYSVIPQWSRLLGGVFFSFWVLTHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGTNQIGGSFQFP* 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0051 1144 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 583 714 IPR029044 -
Lan6g0051 1144 MobiDBLite consensus disorder prediction 1 20 - -
Lan6g0051 1144 Pfam RING/Ubox like zinc-binding domain 128 177 - -
Lan6g0051 1144 Pfam Cellulose synthase 373 1135 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lan6g0051 1144 SUPERFAMILY RING/U-box 111 180 - -
Lan6g0051 1144 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 33 1142 - -
Lan6g0051 1144 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 33 1142 - -
Lan6g0051 1144 MobiDBLite consensus disorder prediction 1 34 - -
Lan6g0051 1144 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 190 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0051 Lan-Chr6 332355 337588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0051 2 1144 Glycosyltransferase AT3G03050 83.927 0.0 2013
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0051 K20924 - gmx:100792604 2196.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0060 17 326433 331708 Lan6g0051 6 332355 337588 LSH
Lan18g1154 18 16360794 16366286 Lan6g0051 6 332355 337588 LSH