Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1252 ATGGCTGCAACTAGGGAACAAAGGTTTGAGAGAGTTACTAAGAATCTGAAGGTGGCAAGAGTTTTTAACACATTGGTGGAAGAGATGAAAGCAATGGGAATAGCAGCACCAGATGACTCTCAATGTACAGAGGTGATGGCACCAATGGCTCACAGTGATAGAAGCCCTGTGCTGCTCCTCATGGGGGGAGGTATGGGAGCTGGCAAGAGTACAGTACTCAAGGACATTCTCAAAGAACCTTTATGGGCAGGAGCAGCAGGGAATGCTGTAATCATTGAAGCAGACGCCTTCAAAGAATCAGATGTCATCTATAGGGCCCTTAGCTCAAGAGGGCATCATCATGACATGATTCGAACAGCTGAACTGGTACACCAATCATCCACAGATGCAGCCTCATCCCTCCTTGTAACGGCACTAAATGAGGGGCGAGATGTAATTATGGATGGCACACTCTCCTGGATACCATTTGTTGTGCAGACAGTCACAATGGCCAGAAATGTCCACCGCCGCCGTTACCGCATGGGACCTGGCTACAGGGTGAATGAAGATGGAAATGTAACTGAAAACTATTGGGAGCGAACTGAAGATGAACAACCTGAACAGTTTGGAGGCAAAAAGAGAAAACCATATAGAATAGAGCTGGTTGGAGTAGTATGTAATGCTTACCTTGCAGTTGTAAGAGGCATAAGGAGAGCTGTGACAACAAGAAGAGCAGTAAGAGTAAAATCACAATTGAAATCACACAAGAGATTTGCTGAAGCATTTATGACTTATTGTCAACTAGTAGACAATGCAAGGCTATACTGCACAAATGTGTTGGATGGCCCAGCCAAGTTGATAGGATGGAAAGATAGAGACAAGACACTGCTAGTTGATCCAGATGAAATAGATTGTTTGAAGAGGGCTGCTAAGTTGAATGAAGATGCAGACTCTGTATATGAACTTTACAAGCACCCCAATCCAGCTCTTAGAGCTGGATCAGTATGGAAAGACATTGTATTATCTCCTTCAAGGTTGAACATCCAACTGGAGCTCAAGTACTCAATCCAAAAGATTGAGAACATCAAAAATTATAACCTCAAGGAGCACAAATGA 1095 0.4384 MAATREQRFERVTKNLKVARVFNTLVEEMKAMGIAAPDDSQCTEVMAPMAHSDRSPVLLLMGGGMGAGKSTVLKDILKEPLWAGAAGNAVIIEADAFKESDVIYRALSSRGHHHDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWIPFVVQTVTMARNVHRRRYRMGPGYRVNEDGNVTENYWERTEDEQPEQFGGKKRKPYRIELVGVVCNAYLAVVRGIRRAVTTRRAVRVKSQLKSHKRFAEAFMTYCQLVDNARLYCTNVLDGPAKLIGWKDRDKTLLVDPDEIDCLKRAAKLNEDADSVYELYKHPNPALRAGSVWKDIVLSPSRLNIQLELKYSIQKIENIKNYNLKEHK* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1252 364 Pfam Zeta toxin 50 164 IPR010488 GO:0005524|GO:0016301
Lan5g1252 364 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 359 - -
Lan5g1252 364 PANTHER UNCHARACTERIZED 1 359 IPR044802 -
Lan5g1252 364 Gene3D - 39 278 IPR027417 -
Lan5g1252 364 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 181 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1252 Lan-Chr5 26261027 26263797 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1252 - - lang:109348463 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1252 5 26261027 26263797 Lan8g0706 8 9156610 9160241 PCT
Lan5g1252 5 26261027 26263797 Lan4g1749 4 26138033 26141857 PCT
Lan8g0706 8 9156610 9160241 Lan5g1252 5 26261027 26263797 PCT
Lan4g1749 4 26138033 26141857 Lan5g1252 5 26261027 26263797 PCT