Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1749 ATGCAGAAAGAATATACAGATGGGAAAACAACAAGCTTCACACAAATCATGGTTGCCTCTTCCATTGGGTTGATATTTGCTGTGGCAATGCATTATCGTCTCAAAAATATGAGAGATCAGAAGATTATACCACGTCTCAGATTATCAAAACATGGCCAACCCCCTAAGCTTGAAAGGTTCTCTCATTACGTAGCTGGGCAAATGGGGTTCAAAGATAGGAGAAGTTGTCCACATTTATGTAAACTGGCTTCTGAATACATAAGAAAATGTGATGGGTGTGAAGATGATATATACGCCTTTTTTGAGAACGAACCGGATGCGGATTCGCTTTTTGTGAAGCTTGTAGAGGAGTTTGAGAGATGCATTCTCAGTTACTTTGCATTCCATTGGAAACATGGTGATGTTTTGATTAGTCAGGTGATGAGTTCTGAATCTGAGCCAAAAAAGAAGCTCAAGAACATAGTTATGGCTGCAACTAGGGAACAAAGGGTGGAAAGGGTAACCAAGAATCTGAAGGTGGCTAGAGTTTTTAATACCTTGGTAGAAGAGATGAAAGCAATGGGACTTGTATCAGCTGATGACTCCCAATGCACAGAAGTGATGGCTCCAGTAGCTCACAGTGATAGGAGTCCAGTGCTCCTTTTCATGGGAGGTGGTATGGGAGCTGGTAAGAGCACAGTGCTTAAGGAGATTCTCAAAGAACCTTTCTGGGCAGGAGCAGCAGGGAATGCTGTTGTTATTGAGGCAGATGCCTTTAAAGAATCAGATGTCATCTATAAGGCCCTTAGTTCAAGAGGGCATCATCATGACATGATTCGAACAGCTGAACTGGTACACCAATCTTCCACAGATGCAGCCTCATCACTTCTGGTAACAGCACTAAATGAGGGGAGGGATGTAATTATGGATGGAACACTCTCCTGGGTACCATTTGTTGTGCAGACAATAACAATGGCCAGAAATGTCCACCGCCGCCGTTACCGCATGGGAGCTGGATACAGGATGAACGATGATGGAACTGTAACTGAAAACTACTGGCAGCGAATTGAAGGTGAAGAACCTGAACAAGTTGAAGGGAAAAAGAGAAAGCCATATAGGATAGAACTGGTTGGAGTAGTCTGTGATGCTTACCTTGCTGTCATTAGAGGCATAAGGAGAGCTATCATGTGTAGAAGAGGAGTGAGAGTGAAGCCACAATTGAAATCCCACAAGAGATTTGCTGATGCTTTTATGACTTACTGTCAGCTAGTAGACAATGCCCGGCTATACAGTACAAATGCTTTGGAAGGGCCACCTAAGTTGATAGGATGGAAAGATAGAGACAAGACACTGCTGGTTGATCCAGATGAAATCGACTGCTTGAAGAAGGTTGCTAGGTTGAATGAAGATGCCAACTCCATATATGAACTATACAAACATCCAAACCCGGTCCGTGAAGCTGGATCCATTTGGAAAGACATTGTATTATCACCTTCAAGGTTGAACATCCAACAAGAGCTCAAGTATTCAATCCAAAAAGTTGAGATATATAAAAGTTGTTTATGA 1545 0.4259 MQKEYTDGKTTSFTQIMVASSIGLIFAVAMHYRLKNMRDQKIIPRLRLSKHGQPPKLERFSHYVAGQMGFKDRRSCPHLCKLASEYIRKCDGCEDDIYAFFENEPDADSLFVKLVEEFERCILSYFAFHWKHGDVLISQVMSSESEPKKKLKNIVMAATREQRVERVTKNLKVARVFNTLVEEMKAMGLVSADDSQCTEVMAPVAHSDRSPVLLFMGGGMGAGKSTVLKEILKEPFWAGAAGNAVVIEADAFKESDVIYKALSSRGHHHDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRRRYRMGAGYRMNDDGTVTENYWQRIEGEEPEQVEGKKRKPYRIELVGVVCDAYLAVIRGIRRAIMCRRGVRVKPQLKSHKRFADAFMTYCQLVDNARLYSTNALEGPPKLIGWKDRDKTLLVDPDEIDCLKKVARLNEDANSIYELYKHPNPVREAGSIWKDIVLSPSRLNIQQELKYSIQKVEIYKSCL* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1749 514 Gene3D - 194 430 IPR027417 -
Lan4g1749 514 Pfam Zeta toxin 205 318 IPR010488 GO:0005524|GO:0016301
Lan4g1749 514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 206 344 IPR027417 -
Lan4g1749 514 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 7 511 - -
Lan4g1749 514 PANTHER UNCHARACTERIZED 7 511 IPR044802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1749 Lan-Chr4 26138033 26141857 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1749 - - adu:107473533 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1749 4 26138033 26141857 Lan4g1749 4 26138033 26141857 ECH
Lan8g0706 8 9156610 9160241 Lan4g1749 4 26138033 26141857 LSH
Lan5g1252 5 26261027 26263797 Lan4g1749 4 26138033 26141857 PCT
Lan4g1749 4 26138033 26141857 Lan5g1252 5 26261027 26263797 PCT