Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1207 ATGAGAAGTGAGTCAAAGAAGGTACCCAAGTTGAAGTCATGGTGGCTAAAATTAGCTGTGAGGAAATGGCTTAATAGAAAGAGTAGTGCTAACAAGCTTGTAAGAGAGGGGTTGTTGATGGATTCATCACATGGAATGAGAGGCTCAGAACTTAGGAATGAAGAAACACACGTTCCTGTCACTGATGCTCTGGACCTTAGGATGTTTGTTGGGACATGGAATGTTGGAGGGAAGTCACCAAATGATAGTTTGAATTTAAGGGATTGGTTGAAGTCTCCTTCACAACCTCATATTTATGTTATCGGGTTGCAAGAAATTGTTCCTCTAAATACAGGGAACGTTATTGGGCCAGAGGACATTGGCCCAATATCAAAATGGGTGGGCCTTATTAGTGAAGCATTGAACAACAACCATAATAAGAGAGCGACACATAATGAGAGAGATTATTGGGTAGTAGTTGAAAGGAAGCAAATGGTTGGTATATTCTTGTGCGTGTGGATACACATTGATCTTTACACATATGTTAGCAACATTAATGTGTCATGTGTTGGCAGAGGCATCATGGGTTATCTTGGAAATAAGGGTTCAATATCAATTAGCATGAGATTGTCCCACACCACATTCTGCTTTGTTTGCACTCACTTAGCCTCTGGAGAGAAAAATGGTGATGAGATTCGAAGAAACTTGGACGTTTCCAAAATCTTGAAGAAAACTAAATTTCCTCACCCATTTAAATCTCATTATCATCCTCAAACAATACTTGAACATGATAATGTTATTTGGCTTGGGGACTTGAATTATCGACTTGTTCCTGGTTATAAAGATACACATGAACTATTAAAGATGAATAATTGGCAGGCACTATTGGAAATGGATCAGCTAAGGATAGAGCAAAGAGCTGGTAGAGTATTCAAAGGTTGGAATGAAGGAAGGATATACTTTGCGCCGACATACAAATATTTGGCCAATTCTGATAACTATGTTGCCCAAACTTCCAAATCCAAGGAAAAAAAGAGAACTCCTGCATGGTGTGATAGGATTCTATGGAAAGGGGAAGGTCTAAAGCAAATGTGGTATGTTAGAGGAGAGTCCAAGTTCTCAGACCACAGGCCTGTGTACTCACTATTCTCACTTCAACTAGACTTGAGAAGCAAGTATCTTACACCTACTCCATTTTCATCAACTTTTGCTTCTAAAGTACAAGTAGAAGAACAGATCTTGGTACTTGAAGGGTACAAAGTATCATAG 1248 0.3918 MRSESKKVPKLKSWWLKLAVRKWLNRKSSANKLVREGLLMDSSHGMRGSELRNEETHVPVTDALDLRMFVGTWNVGGKSPNDSLNLRDWLKSPSQPHIYVIGLQEIVPLNTGNVIGPEDIGPISKWVGLISEALNNNHNKRATHNERDYWVVVERKQMVGIFLCVWIHIDLYTYVSNINVSCVGRGIMGYLGNKGSISISMRLSHTTFCFVCTHLASGEKNGDEIRRNLDVSKILKKTKFPHPFKSHYHPQTILEHDNVIWLGDLNYRLVPGYKDTHELLKMNNWQALLEMDQLRIEQRAGRVFKGWNEGRIYFAPTYKYLANSDNYVAQTSKSKEKKRTPAWCDRILWKGEGLKQMWYVRGESKFSDHRPVYSLFSLQLDLRSKYLTPTPFSSTFASKVQVEEQILVLEGYKVS* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1207 415 SUPERFAMILY DNase I-like 61 381 IPR036691 -
Lan5g1207 415 Pfam Endonuclease/Exonuclease/phosphatase family 71 369 IPR005135 GO:0003824
Lan5g1207 415 Gene3D Endonuclease/exonuclease/phosphatase 47 401 IPR036691 -
Lan5g1207 415 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 149 404 IPR045849 GO:0004445|GO:0046855
Lan5g1207 415 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 34 145 IPR045849 GO:0004445|GO:0046855
Lan5g1207 415 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 149 404 - -
Lan5g1207 415 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 34 145 - -
Lan5g1207 415 SMART i5p_5 64 384 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1207 Lan-Chr5 25996886 26002000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1207 45 350 Acyl Lipid Metabolism Gene Families AT2G43900 30.659 2.30e-38 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1207 - - vun:114176714 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0455 9 6842693 6857804 Lan5g1207 5 25996886 26002000 LSH
Lan5g1207 5 25996886 26002000 Lan19g0466 19 6579769 6587138 LSH