Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0466 ATGAGAACCGAGTCAAAGAAGATATCTAAGTCATCGTGGCCTAAATTAGCTGTGAGGAAGTGGCTTAATAGAAGGAGCAGCGCTGGCAAGTTAGCAACAGAGGGGTGGTTGATGGATTCTACAAATGGAATGAAAGGGTCAGATCTTGGGAATGAAGCAACGCACGTTTCTGTCACTGATGCTGTCGACCTTAGGATATTCGTGGGGACATGGAATGTTGGAGGGAAGTCACCAAATGATGGTTTGAACTTAAGGGATTGGTTGAAGTCTCCTTCACCCGCTGATCTATATGTTATTGGGTTCCAAGAAATAGTGCCACTAAATGCAGGGAACGTGCTTGGGCCAGAGGACAGTGGCCCATTATCAAAGTGGCTGGGCCTTATTCGAGAAGCCTTGAACACTACCACATATAATAACAGTTGTGAGCCTGACAAACATGGAAGCCCAAAGCCCAAGCCCAGTTTCTCAGAACTCCTATCTTTAGAAGTTGAGTTGGAGAATGATGAAAATTATCCTAAAAGCCCAAGGGATGAGGGTGGGTATTGCCTAGCAGGAAGCAAGCAAATGGTTGGTATATTCTTGTGCGTATGGGTACGCGCTGATATTTACAAACATGTTAACAATATGAAGGTGTCGTGTGTTGGTAGAGGCATCATGGGCTATCTTGGAAATAAGGGTTCAATATCAATAAGCATGACATTGTACAACACCACGTTTTGCTTTGTTTGCACTCACTTGGCCTCCGGAGAGAAAGATGGTGATGAGGTTCGAAGAAACTTAGACGTCTCAGAAATCTTGAAGAAAACTAAATTTCCTCACTCTTTTAAATCTCCTTGTCATCCTCAAACCATATTGGAACATGATAATGTTGTTTGGCTTGGGGACTTGAATTATCGGCTTGTTGCTGGTTATGATGATACACATGAGCTACTAAAGAATAATAATTGGCAAGCACTATTAGAAAAGGATCAGCTAAGGATAGAGCAGAGAGGTGGTCGAGTATTTAAAGGCTGGAATGAAGGAGGGATATGCTTTGCCCCAACTTACAAATACTTAGCCAATTCTGATGACTATGTTGCCCAAACGTGTAAGGAGAAAAGAAGGACTCCTGCTTGGTGTGATAGGATTCTATGGAAAGGTGATGGCCTAAAACAGATGTGTTATGTTAGAGGAGAGTCCAAATTCTCAGACCATAGGCCTGTGTACTCACTATTTTCAGTTCAACTAAACTTGACAAACAAGTATCTCACACCTTCTGATGCTACCACAGTTATCCCAAGGTCATGCCCCTCTAAGGCATTGACAAATGCTACATTGTCATCAAATTGTGCTTCTAAAGTACAAGCAGAAGAGCAGCTCATGTTACTAACAAGGGTACAGAGTTGCATTGACCCTGCACCTAGGTTCTGA 1410 0.4277 MRTESKKISKSSWPKLAVRKWLNRRSSAGKLATEGWLMDSTNGMKGSDLGNEATHVSVTDAVDLRIFVGTWNVGGKSPNDGLNLRDWLKSPSPADLYVIGFQEIVPLNAGNVLGPEDSGPLSKWLGLIREALNTTTYNNSCEPDKHGSPKPKPSFSELLSLEVELENDENYPKSPRDEGGYCLAGSKQMVGIFLCVWVRADIYKHVNNMKVSCVGRGIMGYLGNKGSISISMTLYNTTFCFVCTHLASGEKDGDEVRRNLDVSEILKKTKFPHSFKSPCHPQTILEHDNVVWLGDLNYRLVAGYDDTHELLKNNNWQALLEKDQLRIEQRGGRVFKGWNEGGICFAPTYKYLANSDDYVAQTCKEKRRTPAWCDRILWKGDGLKQMCYVRGESKFSDHRPVYSLFSVQLNLTNKYLTPSDATTVIPRSCPSKALTNATLSSNCASKVQAEEQLMLLTRVQSCIDPAPRF* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0466 469 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 33 454 IPR045849 GO:0004445|GO:0046855
Lan19g0466 469 SUPERFAMILY DNase I-like 59 409 IPR036691 -
Lan19g0466 469 Gene3D Endonuclease/exonuclease/phosphatase 49 427 IPR036691 -
Lan19g0466 469 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 33 454 - -
Lan19g0466 469 SMART i5p_5 62 413 IPR000300 GO:0016791|GO:0046856
Lan19g0466 469 Pfam Endonuclease/Exonuclease/phosphatase family 69 398 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0466 Lan-Chr19 6579769 6587138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0466 42 436 Acyl Lipid Metabolism Gene Families AT2G43900 27.333 1.92e-38 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0466 - - gmx:100800223 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0455 9 6842693 6857804 Lan19g0466 19 6579769 6587138 LSH
Lan5g1207 5 25996886 26002000 Lan19g0466 19 6579769 6587138 LSH