Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1162 ATGCAATATATAAAACCAGCGTTTCGAAACGCGAACCACACCTTCACCTTATTACGCTTCTCCTTAAACCCCTTCATTCTCGTTTCGCTACCATATCTCAAATTCGAAACGTTTCGTCATTCACACCCCGTTTCTTCATTCTCCTCGTTGTCAATGGCAAATGGCGACAACCCTCTATCTTCCTATTCGCTCGAGAAACAGTTCGAGACCTTCAGAACTGAGCTAGAAGAATCTGGAACCTTGAGAGAGCGAATTCGAAGCGTGGTTTCGGAGATTGAATCAACAACTAGGGTTATGTATGCTACGCTTCTTCTCGTTCATCAATCTCGCTCCGTTAATGAGCTTTTAGAGAAGGCTAAGTCTCAGATTGATGTGCTAAAGGAGAAGTACAAGCAGCTTGCTCAAATTCTTGGAGGTTGCTCTGGTCAATACTATAGGTACCATGGTGATTGGAAGAGTGAGACACAGTCTGTAGTTTCGCTGCTTACGTTTATGCACTGGCTTGAAACCGGAAACCTTCTCGAGCACAAAGAGGCTGAGGACAAACTTGGGTTGAATAATTCAGAGTTTGGTCTAGATGTTGAAGACTACCTAATAGGTGTTTGTTTTATGTCTAATGAATTGCCAAGGTATGTGGTAAATCAAGTAACAGCTGGGGACTATGATTGTCCAAGGAAGGTCTTAAAGTTTTTAACAGATCTCCATGCTGCATTTCGCTTGCTTAATCTTCGAAACGATTTTCTGCGGAAAAAGTTTGATGGCATGAAGTATGACCTGAGAAAAGTTGAAGAAGTTCATTATGATGTTAAGATTCGGGGCTTGACGCCTAATGGTGAATCTGTTGGAGATAAAGGAGTTGAAGGATAA 867 0.4198 MQYIKPAFRNANHTFTLLRFSLNPFILVSLPYLKFETFRHSHPVSSFSSLSMANGDNPLSSYSLEKQFETFRTELEESGTLRERIRSVVSEIESTTRVMYATLLLVHQSRSVNELLEKAKSQIDVLKEKYKQLAQILGGCSGQYYRYHGDWKSETQSVVSLLTFMHWLETGNLLEHKEAEDKLGLNNSEFGLDVEDYLIGVCFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHAAFRLLNLRNDFLRKKFDGMKYDLRKVEEVHYDVKIRGLTPNGESVGDKGVEG* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1162 288 CDD Translin 71 273 IPR033956 GO:0003697|GO:0003723|GO:0016070
Lan5g1162 288 Coils Coil 109 136 - -
Lan5g1162 288 Pfam Translin family 82 273 IPR002848 GO:0043565
Lan5g1162 288 PANTHER TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X 62 277 IPR002848 GO:0043565
Lan5g1162 288 Gene3D Translin; domain 2 191 286 IPR016069 GO:0043565
Lan5g1162 288 Gene3D Translin; domain 1 47 190 IPR016068 GO:0043565
Lan5g1162 288 PANTHER TRANSLIN 62 277 IPR033956 GO:0003697|GO:0003723|GO:0016070
Lan5g1162 288 SUPERFAMILY Translin 64 274 IPR036081 GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1162 Lan-Chr5 24899952 24903572 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1162 - - adu:107493507 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1162 5 24899952 24903572 Lan19g0238 19 2498185 2502000 LSH