Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0238 ATGCAATATATAAAACCAGCGTTTCGAAACGCTTTCCACACTTTCACCTCTTCACGTTTCTCCTTAAACCCTAACCCCTTCATCCTCGTTTCGCTCCCAAATCTCACCTTCGAAACGTTTCGTCGCTCACACCCCGTTTCTTCCTTCTCCTCCTCGTCAATGGCGGACGGTGACAGCTACGCGCCATCACATTCGCTCGAGAAACAGTTCGAGGCCTTCAGAACCGAGCTAGAAGAATCTGGAACCTTGAGAGAACGAATTCGAAGTGTGGTTTCGGAGATTGAATCCACAACTAGGGTCATGTATGCTACACTTCTTCTTGTTCATCAATCTCGCTCCATCAGTGAGCTTTTAGAGAAGGCTAAGTCTCAGATTGTTGTGCTAAAGGAGAAGTACAAGCAACTTGCTCAAATTCTTGGAGGTTGCTCTGGGCAATACTATAGGTACTATGGTGATTGGAGGAGTGAGACACAGTCTGTAGTTTCGATCCTTACTTTTATTCACTGGCTTGAAACAGGAAGCCTTCTTGAGCACAAAGAAGCCGAGGAAAAACTTGGGTTGAATAATTCGGAGTTTGGTCTAGATGTTGAAGACTACCTAATAGGTGTTTGTTTTATGTCCAATGAATTGCCAAGGTATGTGGTGAATCAAGTAACAGCTGGGGACTATGATTGTCCAAGGAAGGTCTTAAAGTTCTTAACAGATCTCCATGCTGCGTTCCGCTTGCTTAATCTTCGAAATGATTTTCTGCGGAAAAAGTTTGATGGCATGAAATATGACCTACGAAAAGTTGAAGAAGTTTACTATGATGTCAAGATTCGGGGTTTGACGCCTAATGGCGAGTCAGTTGGAGATAAAGGGATTGAAGGATAA 873 0.4364 MQYIKPAFRNAFHTFTSSRFSLNPNPFILVSLPNLTFETFRRSHPVSSFSSSSMADGDSYAPSHSLEKQFEAFRTELEESGTLRERIRSVVSEIESTTRVMYATLLLVHQSRSISELLEKAKSQIVVLKEKYKQLAQILGGCSGQYYRYYGDWRSETQSVVSILTFIHWLETGSLLEHKEAEEKLGLNNSEFGLDVEDYLIGVCFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHAAFRLLNLRNDFLRKKFDGMKYDLRKVEEVYYDVKIRGLTPNGESVGDKGIEG* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0238 290 CDD Translin 73 275 IPR033956 GO:0003697|GO:0003723|GO:0016070
Lan19g0238 290 PANTHER TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X 59 279 IPR002848 GO:0043565
Lan19g0238 290 Coils Coil 118 138 - -
Lan19g0238 290 Pfam Translin family 84 275 IPR002848 GO:0043565
Lan19g0238 290 Gene3D Translin; domain 1 48 192 IPR016068 GO:0043565
Lan19g0238 290 PANTHER TRANSLIN 59 279 IPR033956 GO:0003697|GO:0003723|GO:0016070
Lan19g0238 290 Gene3D Translin; domain 2 193 287 IPR016069 GO:0043565
Lan19g0238 290 SUPERFAMILY Translin 66 276 IPR036081 GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0238 Lan-Chr19 2498185 2502000 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0238 - - adu:107493507 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1162 5 24899952 24903572 Lan19g0238 19 2498185 2502000 LSH