Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1095 ATGAGTAGGTCAGGCCAGCCTCCAGATTTGAAAAAGTACATGGATAAGAAGCTTCAGATCAAGCTGAATGCAAATCGGATGATCGTGGGTACTCTCCGTGGCTTTGACCAGTTTATGAATTTAGTTGTTGACAACACTGTGGAAGTGAATGGCAATGAGAAAACTGACATAGGCATGGTGGTAATCAGAGGAAATAGCGTGGTCACTGTCGAGGCACTTGAACCGGTGAATAGGACATGA 240 0.4458 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMVVIRGNSVVTVEALEPVNRT* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1095 79 Pfam LSM domain 9 71 IPR001163 -
Lan5g1095 79 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN 1 79 IPR044641 -
Lan5g1095 79 SUPERFAMILY Sm-like ribonucleoproteins 9 76 IPR010920 -
Lan5g1095 79 Gene3D - 1 76 - -
Lan5g1095 79 CDD Sm_G 6 74 IPR034098 GO:0000387|GO:0005681
Lan5g1095 79 SMART Sm3 8 72 IPR001163 -
Lan5g1095 79 PIRSF Lsm7 5 78 - -
Lan5g1095 79 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN G 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1095 Lan-Chr5 24253520 24255428 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1095 K11099 - gmx:100305530 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1095 5 24253520 24255428 Lan5g1095 5 24253520 24255428 ECH
Lan5g1095 5 24253520 24255428 Lan19g0372 19 4566627 4568460 LSH