Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0372 ATGAGTAGGTCAGGGCAGCCTCCGGATTTGAAGAAGTATATGGACAAGAAGCTTCAGATCAAGCTGAATGCAAATCGGATGATTGTGGGTACTCTCCGGGGTTTTGATCAGTTTATGAATTTAGTTGTTGACAACACTGTGGAAGTGAATGGCACTGAGAAAACTGATATAGGGATGGTGGTAATCAGAGGAAATAGTGTGGTCACCGTTGAGGCACTTGAACCGGTGAACAGGACATGA 240 0.4458 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGTEKTDIGMVVIRGNSVVTVEALEPVNRT* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0372 79 CDD Sm_G 6 74 IPR034098 GO:0000387|GO:0005681
Lan19g0372 79 SUPERFAMILY Sm-like ribonucleoproteins 8 75 IPR010920 -
Lan19g0372 79 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN G 1 79 - -
Lan19g0372 79 Pfam LSM domain 9 71 IPR001163 -
Lan19g0372 79 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN 1 79 IPR044641 -
Lan19g0372 79 Gene3D - 1 76 - -
Lan19g0372 79 SMART Sm3 8 72 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0372 Lan-Chr19 4566627 4568460 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0372 K11099 - gmx:100305530 153.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1095 5 24253520 24255428 Lan19g0372 19 4566627 4568460 LSH