Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1074 ATGGAACCGAATGCATTTTCCTTCCTCTCCAAGGGTTGGAGAGAGGTTCGTGACTCTGCTGATGCAGATCTTCGTTTAATGAAGGACCGAGCCAACTCGTTCAAGAACCTAGCAACGTCATTCGACCGTGGACTCGATAACTTCTTGAATTCCGCCACTCCTCCGCCTTTCTCCATCCCCGCCATGAACTCTCCTCCACCGCCGGAGATCGAGTTCGTGAAGAAGTTGCGGCCTAAATTGTCTGCAATGCGGAGGGCGTACTCTTCGCCTGATTTCAGCAAGAATGTTCTGGAGAAGTGGCGCCCTAAGGCACGCATTCGGATCGATTTGTCGGCGATTCGGAACGCTATTGTTTCGGAGATGGAAGAGGTAGAGGAATCTGATGAGAATGTTGTGGAATTTGAGAGGGAAAAGAGGGGAAGGAGGTTGAGTTTGAAGGAGTTTTGGGATTGGGGAGAGTGGAAAGGAGATGGTGAAGTTCGTGATTGGGAACCAATTCGGAAATTGAAGAGTAGATTTAAAGAGTTCGAAAAGAACAGTGAGTTCGTGGAGAAATTCAAGTCAAGTTTGAAATCAATGTGCAGGCATCCTCAAGAGTCAAAGGAAGTGCAACCACTGGATGTACCGGAACTTCTAGCATACTTTGTTAAACAATCTGGGCCATTTTTGGATCAAATTGGAGTTAGAAGAGAGATATGTGACAAGATAGTAGAAAGCTTGTATAGCAAACGCAAGAACAAACTTCTACTACAGTCCCTTCCTGGAGAAGAATCTGCTGTCGCTGGGAATGAAAACGTAAATGATGATTTGGATTTGCGAATTGCAAGTGTCCTTCAGAGCACAGGGCACAGGTATGACGGTGGATTATGGACACACCCTGCAAAGCGTGATGCATCAGACAATGAAAGACATGTCGCAATAGTCACAACTGCTAGTCTTCCTTGGATGACAGGAACAGCTGTAAACCCACTATTTCGAGCTGCATATTTATCACAATCCGGAAAACAGAAAGTCACTCTGCTGGTTCCATGGCTTTGTAAATCAGATCAAGAACAAGTTTATCCCAGCAATGTTATTTTTACTTCACCCGAGGAGCAGGAAGCTTATATACGCAACTGGCTGGGGGAAAGGATTGGTTTTAAGGCAGACTTCAAAATTTCCTTTTATCCTGGGAAGTTTTCAAAATCAAGACGTAGTATAATACCTGCTGGAGATACTTCTCAATTTATACCATCCAGGGATGCTGACATTGCTATTCTGGAAGAACCAGAACATTTGAATTGGTATCATCATGGTAAGCGTTGGACGGACAAATTCAACCATGTTGTTGGTATTGTCCACACGAATTACTTAGAATACATCAAGAGGGAGAAAAATGGGGCTCTTCAGGCATTCCTTGTGAAACACATAAACAACTGGGTTACAAGAGCGTATTGTGACAAGGTCCTTCGCCTCTCAGCTTCCACTCAAGATTTACCCAAGTCTGTAATTTGCAATGTCCATGGTGTGAATCCGAAGTTCTTACAAATTGGAGAGAAGGTTGCTGCAGAAAGGAAGCTAGGCCAGATAGCTTTCACAAAAGGGGCATATTTCTTGGGAAAGATGGTATGGGCAAAGGGGTATAAGGAGTTGATTGATTTGTTATCAAAGCATAAGACTGACCTTGATGGCTTTAACATGGATGTATTTGGAAGCGGAGAGGACGCTAATGAAGTTCATATGGCAGCTAGGAGATTGGATTTGAATCTCAACTTCCAGAATGGAAGGGACCATGCAGATGATTCTCTTCATGGGTACAAAGTCTTCATAAATCCTAGCGTTAGTGATGTGCTATGTACCGCTACAGCTGAGGCACTCGCCATGGGAAAATTTGTAGTTTGTGCTGATCATCCATCAAATGAGTTCTTCATGTCATTTCCCAACTGTTTGACTTACAAGACATCTAATGACTTCGTTGCGAAGGTAAAAGAAGCACTAGAAAATGAACCTCATCCTCTTACACCTGGGCAAAGATATCAACTTTCTTGGGAGGCTGCTACTCAAAGATTTATCGAATATTCCGAGCTGGACGGAATATTGAACAATGAAAAGGATGGTGCTAAGTCAAGTACATATAATAGAAAGCGCATCACCAAGTCAGTTTCTATGCCTAATCTGACACAAATTGTAGATGGAAGCTTGGCATTTGCTCATTACTGTATGACGGGGAACGAGTTCCTGAGATTATGTTCAGGAGCAATGCCTGGAACCCGCGATTATGACAAGCAGCACTGCAAAGACCTTAATCTCTTGCCCCCACAGGTAGAAAATCCTATCTATGGCTGGTAA 2328 0.436 MEPNAFSFLSKGWREVRDSADADLRLMKDRANSFKNLATSFDRGLDNFLNSATPPPFSIPAMNSPPPPEIEFVKKLRPKLSAMRRAYSSPDFSKNVLEKWRPKARIRIDLSAIRNAIVSEMEEVEESDENVVEFEREKRGRRLSLKEFWDWGEWKGDGEVRDWEPIRKLKSRFKEFEKNSEFVEKFKSSLKSMCRHPQESKEVQPLDVPELLAYFVKQSGPFLDQIGVRREICDKIVESLYSKRKNKLLLQSLPGEESAVAGNENVNDDLDLRIASVLQSTGHRYDGGLWTHPAKRDASDNERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSGKQKVTLLVPWLCKSDQEQVYPSNVIFTSPEEQEAYIRNWLGERIGFKADFKISFYPGKFSKSRRSIIPAGDTSQFIPSRDADIAILEEPEHLNWYHHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFLVKHINNWVTRAYCDKVLRLSASTQDLPKSVICNVHGVNPKFLQIGEKVAAERKLGQIAFTKGAYFLGKMVWAKGYKELIDLLSKHKTDLDGFNMDVFGSGEDANEVHMAARRLDLNLNFQNGRDHADDSLHGYKVFINPSVSDVLCTATAEALAMGKFVVCADHPSNEFFMSFPNCLTYKTSNDFVAKVKEALENEPHPLTPGQRYQLSWEAATQRFIEYSELDGILNNEKDGAKSSTYNRKRITKSVSMPNLTQIVDGSLAFAHYCMTGNEFLRLCSGAMPGTRDYDKQHCKDLNLLPPQVENPIYGW* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1074 775 Gene3D Glycogen Phosphorylase B; 527 671 - -
Lan5g1074 775 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 4 775 - -
Lan5g1074 775 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 305 685 - -
Lan5g1074 775 Pfam Glycosyl transferases group 1 530 661 - -
Lan5g1074 775 CDD Glycosyltransferase_GTB-type 434 636 - -
Lan5g1074 775 Coils Coil 117 137 - -
Lan5g1074 775 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 4 775 IPR044525 GO:0046481
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1074 Lan-Chr5 24053181 24058995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1074 4 597 Glycosyltransferase AT3G11670 67.049 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1074 K09480 - gmx:548059 1311.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1074 5 24053181 24058995 Lan5g1074 5 24053181 24058995 ECH
Lan5g1074 5 24053181 24058995 Lan19g0355 19 4386618 4391870 LSH