Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0355 ATGGAACCTTCTACCTCATCCAATGCGTTCTCGTTCCTCTCTAAGGGTTGGAGAGAGGTTCGTGACTCGGCTGACGCGGATCTCCGTTTAATGAAGGACCGAGCCAACTCGTTCAAGAACCTAGCGACGTCGTTCGACCGCGAACTCGAGAATTTCTTCAACTCTGCTGCTCCTCCTCCTCCGTTCTCCGTCCCCGCCATGCGCTCCTCTGCTCCGGCGGAGATCGAATTCGTGAAGAATTTGCAGCCGAAGCTGTCGGAGATTCGCAGGGCGTACTCTTCCCCTGATTTCAGCAAGAAGGTTTTGGAGAAATGGAAGCCGAAGGCGCAGATTCGGATTGATTTATCAGCGATTAGGAAGGCGATTGTGTCGGAGGTGGAGGAGGAGGAAGGGGAAGGTGATGAGGTTGTGGAATTTGACAGGGAAAAGAGGGGGAGGAAATTGAGTTTGAAGGAGTTTTGGGACTGGGGGGAGTGGAAAGGAGAGAGTGAAGCTCCTGATTGGGAACCAATTCGAAAGTTGAAGAGTAGATTTAAGGATTTGGAGAAGAACGGTGAATTTTTGGAGAAATTTAAGTCTAGCTTGAAATCAATGTGCAGGGATCCTCAAGAATCAAAGGAAGTTCCACCATTGGATGTACCTGAACTTCTAGCCTACTTTGTTAAACAAGCGAGGCCTTTTTTGGATCAACTTGGAGTTAGAAGAGAGATATGTGACAAGTTAGTAGAAAGCTTATATAGCAAACGCAAGAACCAACTTCTACTACAGTCCCTTTCTAGGGAAGAATCTGCTGTTGTTGGGAATGGAAATATAGATGATGAGTTGGATTTGCGAATAGCAAGTGTCCTTCAGAGCACAGGGCACCGGTATGACGGAGGATTCTGGCCACACCCTGCAAAGCATGATGCGTCAGACAATGAAAGACATGTTGCAATAGTCACAACTGCTAGTCTTCCATGGATGACGGGAACAGCTGTAAACCCACTATTTCGTGCTGCATATTTATCACAATCTGCGAAGCAGAAAGTCACTCTGCTGGTTCCATGGCTTTGTAAATCAGATCAAGAACTAGTTTATCCCAGCAATGTCACTTTCACTTCACCTGAGGAGCAGGAAGCTTATATTCGTAATTGGCTTGAGGAAAGGGTTGGTTTTAAGGCAGACTTCAAAATTTCATTTTATCCCGGGAAGTTTTCAAAATCAAGACGTAGTATATTACCCGCTGGAGATACTTCTCAATTTATACCATCCAAGGATGCTGATATTGCAATTCTGGAAGAACCAGAACATTTGAATTGGTATCATCATGGTAAGCGTTGGACAGACAAGTTCAACCATGTTGTTGGTATTGTTCACACAAATTACTTGGAATACATCAAGAGGGAGAAAAATGGGGCTCTTCAGGCGTTCCTCGTGAAACACATAAACAACTGGGTTACAAGAGCATACTGCCACAAGGTTCTCCGTCTCTCAGCTTCAACTCAAGATTTACCCAAGTCTGTAATTTGCAACGTTCATGGTGTGAATCCCAAGTTCTTAATAATCGGAGAGAAAATTGCTGCAGAAAGGGAGCTAGGGCAGAAGGCCTTCACAAAAGGGGCATATTTCTTGGGAAAGATGGTATGGGCAAAGGGATATAAGGAGTTGATAGATTTGTTAGCAAAGCATAAGACTGACCTTGATGGCTTCAAGCTGGATGTATTTGGAAATGGTGAGGATGCTAACGAAGTTCAGAGTGCAGCTAGGAGGCTGGATTTGAATCTCAATTTTCAGAAAGGAAGGGACCATGCCGATGATTCTCTTCACGGGTACAAAGTCTTCATAAATCCTAGCATCAGCGATGTACTATGCACAGCTACAGCTGAGGCACTTGCCATGGGGAAATTTGTAGTTTGTGCTGACCATCCATCAAATGAGTTCTTCAGGTCATTCCCCAACTGTTTGACTTACAAGACATCTGACGACTTTGTGGCAAAAGTAAAAGAAGCATTAGAAAATGATCCTTATCCTCTTACACCTGAGCAAAGATATCAACTTTCTTGGGAGGCTGCTACTCAAAGATTTATGGAATATTCCGAGCTCGATAGAATATTGAACAATGAAAAGGATGGCGCGAAGTCAAGTACACACAATAGAAAGCTCATTACCAAATCAGTGTCAATGCCTAATCTGACAGAAGCTGTAGATGGTGGCTTAGCATTTGCTCACTACTGTCTGACAGGGAACGAATTACTGAGATTATGTTCAGGAGCAATACCAGGAACCCGTGACTACGACAAGCAGCACTGTAAAGACCTTAATCTATTGCCCCCGGAGGTCGAAAATCCTATCTATGGCTGGTAA 2343 0.4439 MEPSTSSNAFSFLSKGWREVRDSADADLRLMKDRANSFKNLATSFDRELENFFNSAAPPPPFSVPAMRSSAPAEIEFVKNLQPKLSEIRRAYSSPDFSKKVLEKWKPKAQIRIDLSAIRKAIVSEVEEEEGEGDEVVEFDREKRGRKLSLKEFWDWGEWKGESEAPDWEPIRKLKSRFKDLEKNGEFLEKFKSSLKSMCRDPQESKEVPPLDVPELLAYFVKQARPFLDQLGVRREICDKLVESLYSKRKNQLLLQSLSREESAVVGNGNIDDELDLRIASVLQSTGHRYDGGFWPHPAKHDASDNERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSAKQKVTLLVPWLCKSDQELVYPSNVTFTSPEEQEAYIRNWLEERVGFKADFKISFYPGKFSKSRRSILPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFLVKHINNWVTRAYCHKVLRLSASTQDLPKSVICNVHGVNPKFLIIGEKIAAERELGQKAFTKGAYFLGKMVWAKGYKELIDLLAKHKTDLDGFKLDVFGNGEDANEVQSAARRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTSDDFVAKVKEALENDPYPLTPEQRYQLSWEAATQRFMEYSELDRILNNEKDGAKSSTHNRKLITKSVSMPNLTEAVDGGLAFAHYCLTGNELLRLCSGAIPGTRDYDKQHCKDLNLLPPEVENPIYGW* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0355 780 Pfam Glycosyl transferases group 1 535 669 IPR001296 GO:0016757
Lan19g0355 780 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 4 780 IPR044525 GO:0046481
Lan19g0355 780 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 4 780 - -
Lan19g0355 780 Gene3D Glycogen Phosphorylase B; 532 686 - -
Lan19g0355 780 CDD Glycosyltransferase_GTB-type 439 641 - -
Lan19g0355 780 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 310 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0355 Lan-Chr19 4386618 4391870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0355 8 602 Glycosyltransferase AT3G11670 68.473 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0355 K09480 - gmx:548059 1331.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1074 5 24053181 24058995 Lan19g0355 19 4386618 4391870 LSH