Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1039 ATGGAGGTTGAAGGTGTATGTGTTGTGTGGCAAGGTGCTATTTTGGGAGGAATACTCTTTTGGATTTTGTCATCATCATACCTCAATCTCACTCAAAAGCTTAGATCTTTTCTACAACCATGGGTCATTCATCATGTTCAAACCAAAACCCATATCGTCCTTCTCATCCAGAGTTACCAACATGGATTTCTGGATGCTCTTTTCTCTGGGTTGTCATGTGTTGTTTCTGTGCCCTTTTACACTGCTTTCCTCCCTCTGCTATTTTGGAGTGGTCATGGCCAATTGGCAAGGCAGATGACATTGCTGATGGCGTTTTGCGATTATATTGGTAACTGCATAAAGGATGTGGTTTCAGCTCCAAGACCTCCCTCTCCACCTGTTCGGAGAGTAGCCACTACAAAAGACGAAGAAGATAATGCCTTAGAATATGGACTGCCTTCTTCTCACACTCTTAACACAGTTTGCTTATCCGGCTATCTTTTGCACTATGTGCTGATTCATACTCAAATTCAAGGTCCCTATGTTAATTACCTTGGAGTTTCCCTTGTTTGCTTGTTCGTGACCCTCATTTGCTTAGGAAGAATTTATCTTGGCATGCATAGTTTGGTTGATATTCTTGCTGGCCTTGTTCTTGGACTCGGGATCCTTGCATTTTGGCTTATAGTTGATGAGCACATAGACAGTTTCGTGATCTCAGGACAAAATGTTACGTCTTTTTGGGTTGCCCTGAGCTTCCTCTTGCTTTTTGCTTACCCAACTCCTGAACTTCCAACTCCAAGCTTTGAATATCACACTGCTTTCAATGGTGTTGCATTGGGAATTGTGACCGGGGTACAACAAACATACCATCAATTTCACCATGGCGCAGTTCCTCATTTGTTCTCCGGAGACCTGACATTACCTGCATTTATGGGAAGAATGATGTTGGGAATACCAACAATTTTGGTAGTGAAATTCTGCAGCAAGACTCTAGCAAAATGGATAATCCCAGTGGTAGCGAACACGTTGGGCATACCGATAAAATCAAGCAGCTATATAAAATCAGATAAGAAGATTAAAGAAGGAGGTTACTTGCTATCAAAGCATGGGGTATTTGATGTTGATACTGGGATTAGATTTGTTCAATATGCAGGTCTTGCTTGGTCTGTGGTGGACCTTGTTCCATCTCTTTTTACGTACACCAACTTGTGA 1191 0.4207 MEVEGVCVVWQGAILGGILFWILSSSYLNLTQKLRSFLQPWVIHHVQTKTHIVLLIQSYQHGFLDALFSGLSCVVSVPFYTAFLPLLFWSGHGQLARQMTLLMAFCDYIGNCIKDVVSAPRPPSPPVRRVATTKDEEDNALEYGLPSSHTLNTVCLSGYLLHYVLIHTQIQGPYVNYLGVSLVCLFVTLICLGRIYLGMHSLVDILAGLVLGLGILAFWLIVDEHIDSFVISGQNVTSFWVALSFLLLFAYPTPELPTPSFEYHTAFNGVALGIVTGVQQTYHQFHHGAVPHLFSGDLTLPAFMGRMMLGIPTILVVKFCSKTLAKWIIPVVANTLGIPIKSSSYIKSDKKIKEGGYLLSKHGVFDVDTGIRFVQYAGLAWSVVDLVPSLFTYTNL* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1039 396 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 6 396 - -
Lan5g1039 396 Pfam PAP2 superfamily 99 220 IPR000326 -
Lan5g1039 396 PANTHER PHOSPHATIDIC ACID PHOSPHATASE TYPE 2/HALOPEROXIDASE-RELATED 6 396 - -
Lan5g1039 396 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 24 237 - -
Lan5g1039 396 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 34 225 IPR036938 -
Lan5g1039 396 SMART acid_phosph_2 96 220 IPR000326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1039 Lan-Chr5 23669672 23676246 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1039 - - gmx:100778490 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0342 9 5238201 5243333 Lan5g1039 5 23669672 23676246 LSH
Lan5g1039 5 23669672 23676246 Lan19g0323 19 3920701 3923743 LSH