Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0323 ATGGAGGGTGAAGGTGCAGGTTGTGCAGTGTGGCAAGGTGTTATTTTAGGAGGAATACTCTTCTGGATTTTATTTTCATCATACCTTAATCTCACTCAAAAGCTTAGATCTTTTCTTCAACCTTGGATCACTCATCATATTCAAACTGGAGCCCCTTTTGTTCTTCACGTCCAGAGTTACCAGCATGGATTCCTGGATGCTCTTTTCTCTGGCTTGTCATGTGTTGTTTCTGTGCCCTTTTACACTGCTTTCCTCCCTCTGCTATTCTGGAGTGGTCATGGCCAATTAGCAAGGCAAATGACATTGTTGATGGCATTTTGTGATTATATTGGGAACTGCATAAAGGATGTGGTTTCAGCTCCAAGGCCTCCCTCTCCACCTGTTAGGAGAGTAACAGCTACAAAAGATGAAGAAGATAATGCCTTAGAATATGGGCTTCCTTCTTCTCATACTCTTAACACAGTTTGCTTATCTGGCTACCTTATGCACTATGTGCTCACTCATACTCAAATTCAAGGTGCCTATGTTAATTATCTTGGAGTTTCCTTTGTTTGCTTGTTCGTGGCCCTCATTGGCATAGGAAGAATTTATCTTGGCATGCATAGTTTGGTTGATATTCTCGCTGGCCTTGTTCTTGGACTTGGGATCCTTGCATTTTGGCTCACAGTTGATGCACACATAGACAGTTTTGTGATCTCAGGAAAAAATGTTATATCTTTTTGGGTTGCCTTGAGCTTCCTCTTGCTTTTTGCTTATCCAACTCCGGAACTTCCAACTCCAAGCTTTGAGTATCACACTGCTTTCAATGGTGTTGCTTTGGGAATTGTTGCCGGGGTTCAGCAAACATACCATCAATTCCACCATGGTTCAGTTCCTCGTTTGTTCTCTCAAGACCTCATAATATCGGCATTCGCAGGGAGAATGATGCTGGGAATACCTACAATTTTGATAGTGAAATTCTGCAGCAAGGCTCTAGCAAAATGGATTATTCCTGTGGTTGCAAACACTTTGGGCATACCAATAAAATCAAGCGGCTATATAAAAAGTGATAAACAAGGAGGTTACTTGCAAAAGCTAGTTTCAAAGCATGAGGCATTTGATGTTGATATTGGAATTAGATTTGTTCAGTATGCAGGTCTTGCTTGGTCTGTTGTGGACCTTGTGCCATCTCTTTTTACATACACCAATTTGTGA 1194 0.4146 MEGEGAGCAVWQGVILGGILFWILFSSYLNLTQKLRSFLQPWITHHIQTGAPFVLHVQSYQHGFLDALFSGLSCVVSVPFYTAFLPLLFWSGHGQLARQMTLLMAFCDYIGNCIKDVVSAPRPPSPPVRRVTATKDEEDNALEYGLPSSHTLNTVCLSGYLMHYVLTHTQIQGAYVNYLGVSFVCLFVALIGIGRIYLGMHSLVDILAGLVLGLGILAFWLTVDAHIDSFVISGKNVISFWVALSFLLLFAYPTPELPTPSFEYHTAFNGVALGIVAGVQQTYHQFHHGSVPRLFSQDLIISAFAGRMMLGIPTILIVKFCSKALAKWIIPVVANTLGIPIKSSGYIKSDKQGGYLQKLVSKHEAFDVDIGIRFVQYAGLAWSVVDLVPSLFTYTNL* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0323 397 Pfam PAP2 superfamily 100 222 IPR000326 -
Lan19g0323 397 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 9 397 - -
Lan19g0323 397 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 126 230 - -
Lan19g0323 397 PANTHER PHOSPHATIDIC ACID PHOSPHATASE TYPE 2/HALOPEROXIDASE-RELATED 9 397 - -
Lan19g0323 397 SMART acid_phosph_2 97 221 IPR000326 -
Lan19g0323 397 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 38 227 IPR036938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0323 Lan-Chr19 3920701 3923743 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0323 - - gmx:100807865 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0342 9 5238201 5243333 Lan19g0323 19 3920701 3923743 LSH
Lan5g1039 5 23669672 23676246 Lan19g0323 19 3920701 3923743 LSH