Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1022 ATGGCTGTTGCAGCTGCAACTATCGTTGTGCCATTGAGCTTGCTCTTCTTTGCTTCAGGTCTCGTTGTTAATCTCATTCAGGCAGTATGCTATGTCCTTGTACGGCCATTGTCAAAGAATTTATACAGACGGATCAATCGGACAGTGGCAGAACTGTTATGGCTGGAACTCGTATGGATTATTGATTGGTGGGCAGGAGTTAAGGTCCAAGTATTCGCAGATCGTGAAACCCTTCGTTTGATGGGTAAAGAGCATGCACTTGTCATATGCAATCACAGAAGTGATATTGATTGGCTCGTTGGGTGGGTTTTAGCTCAGCGTTCAGGTTGCCTTGGCAGCAGTCTTGCTGTTATGAAGAAATCATCAAAGTTTCTGCCGGTCATTGGCTGGTCAATGTGGTTTTCTGAGTATCTTTTTCTCGAGAGAAGTTGGGCTAAGGATGAAAAAACATTGAAGTCAGGCATCCAGCGACTGAGTGATTACCCTCTACCCTTTTGGTTGGCTCTATTTGTAGAAGGAACACGCTTTACACAAGCCAAACTTTTAGCTGCTCAAGAATATGCATCCTCCACCGGATTGCCTATTCCTAGAAACACTTTGATTCCTAGAACTAAGGGTTTTGTTGCTGCAGTAAGTCAAATGCGCTCATTTGTTCCTGCCGTATATGATATAACAATGTCCATCCCCAAGAGTTCACCTACTCCTACTATGCTGAGACTCTTAAAGGGGCAACCTTCAGTGGTGCATGTTCATATCAAGCGGCATTTGATGAAGGAATTACCCGAAACGGATGAATCTGTTGCTCAATGGTGTCGTGATGTATTTGTGGCCAAGGATGCATTGTTGGACAAACATATAGCTGAGGATACTTTCAGTGGTCAAGAGTCGCAGGATAGCGGTCGACCGATAAAGTCTCTCGTGGTTGCAATATCTTGGGCTTGTCTTGTTATTGCTGGGTTTATAAAGTTCCTCCAATGGTCTTCACTACTATCATCATGGAAAGGTGTTGCATTTTCATCATTTGGTTTGGCAGTTGTTACTGCTCTCATGCAAATCTTGATTCGATTTTCACAGTCCGAACGGTCAACCCCGGCCAAGGTTGTCCCTGCAAAGAAAGACTGA 1122 0.4421 MAVAAATIVVPLSLLFFASGLVVNLIQAVCYVLVRPLSKNLYRRINRTVAELLWLELVWIIDWWAGVKVQVFADRETLRLMGKEHALVICNHRSDIDWLVGWVLAQRSGCLGSSLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDEKTLKSGIQRLSDYPLPFWLALFVEGTRFTQAKLLAAQEYASSTGLPIPRNTLIPRTKGFVAAVSQMRSFVPAVYDITMSIPKSSPTPTMLRLLKGQPSVVHVHIKRHLMKELPETDESVAQWCRDVFVAKDALLDKHIAEDTFSGQESQDSGRPIKSLVVAISWACLVIAGFIKFLQWSSLLSSWKGVAFSSFGLAVVTALMQILIRFSQSERSTPAKVVPAKKD* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1022 373 CDD LPLAT_LCLAT1-like 58 253 - -
Lan5g1022 373 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 7 371 - -
Lan5g1022 373 SMART plsc_2 86 208 IPR002123 GO:0016746
Lan5g1022 373 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
Lan5g1022 373 Pfam Acyltransferase 80 228 IPR002123 GO:0016746
Lan5g1022 373 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 7 371 - -
Lan5g1022 373 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 63 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1022 Lan-Chr5 23491405 23499157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1022 3 371 Miscellaneous Gene Families AT3G57650 78.591 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1022 K13523 - gmx:100812696 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1022 5 23491405 23499157 Lan5g1022 5 23491405 23499157 ECH
Lan5g1022 5 23491405 23499157 Lan19g0295 19 3194745 3211496 LSH