Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0295 ATGGCTGTTGCAGCAGCAGCTGTCGTGGTTCCATTGGGCTTGCTCTTCTTTGCTTCAGGTCTCGTTGTTAATCTCATTCAGGCAATATGCTATGTCCTTGTACGCCCACTGTCAAAGAATTTATACAGACGGGTCAACCGGGTAGTAGCAGAGTTGTTGTGGCTGGAACTCGTATGGATTATTGATTGGTGGGCAGGACTTAAGGTCCAAGTATTCACAGATAGTGAAACCCTTCGTTTGATGGGTAAAGAGCATGCACTTGTCATATGCAATCACAAAAGTGATATTGATTGGCTCGTTGGATGGGTTTTAGCTCAGCGTTCAGGTTGCCTCGGCAGCACTCTCGCTGTGATGAAGAAATCATCAAAGTTTCTGCCGGTCATTGGCTGGTCAATGTGGTTTTCGGAGTATCTTTTTCTGGAGAGAAGTTGGGCTAAGGATGAAAACACATTAAAGTCAGGCCTCCAGCGACTGAGTGATTACCCTCTTCCCTTTTGGTTGGCTCTTTTCGTAGAAGGAACACGCTTTACACAGGCTAAACTATTAGCTGCTCAGGAATATGCAGCCTCCACCGGGTATCCAGTTCCTAGAAACACTTTGATTCCTAGAACTAAGGGGTTTGTTGCAGCAGTAAGTCATATGCGCTCATTTGTTCCTGCCATTTATGATATGACCGTGGCCATCCCTAAGAGTTCACCTGCTCCTACTATGCTGAGACTCTTCAAGGGGCAACCTTCAGTGGTGCATGTTCATATCAAGCGGCATTTGATGAAGGAATTGCCTGAAACAGATGACTCTGTTGCTCAATGGTGTCGTGATATATTTGTGGCAAAGGATTCCTTATTAGACAAACATATAGCTGAGGATACTTTCAGTGATCAAGAGCTTCAGGATACTGGTAGACCAATAAAGTCTCTTGTGGTGGTAATATCTTGGGCTTGTCTTGTTATTGCTGGGTTTATAAAGTTCCTCCAATGGTCTTCACTACTTTCATCATGGAAGGGTGTTGCATTTTCATCTTTTGGTTTGGCCATTGTTACTGCTCTCATGCACATCTTGATTAGGTTCTCACAATCAGAACGTTCAACCCCATCCAAGGTTGTTCCTGCAAAGAAAAAGATTGAACAATTGGAGGAAAGTAATGACAAACAACATTAG 1158 0.4387 MAVAAAAVVVPLGLLFFASGLVVNLIQAICYVLVRPLSKNLYRRVNRVVAELLWLELVWIIDWWAGLKVQVFTDSETLRLMGKEHALVICNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDENTLKSGLQRLSDYPLPFWLALFVEGTRFTQAKLLAAQEYAASTGYPVPRNTLIPRTKGFVAAVSHMRSFVPAIYDMTVAIPKSSPAPTMLRLFKGQPSVVHVHIKRHLMKELPETDDSVAQWCRDIFVAKDSLLDKHIAEDTFSDQELQDTGRPIKSLVVVISWACLVIAGFIKFLQWSSLLSSWKGVAFSSFGLAIVTALMHILIRFSQSERSTPSKVVPAKKKIEQLEESNDKQH* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0295 385 CDD LPLAT_LCLAT1-like 58 253 - -
Lan19g0295 385 Pfam Acyltransferase 76 228 IPR002123 GO:0016746
Lan19g0295 385 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 7 376 - -
Lan19g0295 385 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
Lan19g0295 385 MobiDBLite consensus disorder prediction 362 385 - -
Lan19g0295 385 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 7 376 - -
Lan19g0295 385 SMART plsc_2 86 208 IPR002123 GO:0016746
Lan19g0295 385 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 38 286 - -
Lan19g0295 385 MobiDBLite consensus disorder prediction 366 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0295 Lan-Chr19 3194745 3211496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0295 3 383 Miscellaneous Gene Families AT3G57650 77.428 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0295 K13523 - gmx:100812696 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1022 5 23491405 23499157 Lan19g0295 19 3194745 3211496 LSH