Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1014 ATGGGAGAAGCACCAGCATTCTTTGTTGATGACTTGCAAAATGAGCCTCTCAATGGCTTTGAATTGAAAAATGGAACTTGCAAAACTAATACAACCATTGGTTACAAAACATATGTCATTGGTGGAGCTGATGATGGAACTTTGTCCATTGAAGTTCAAATTTTTGACCGTAACCGTGGCGAATGGGTTCATCCAACTGTTCATGGTACAAAACCTATGTCATGCAAAGGCCACTCGGCTGTTCTTTTGAAAGACCGAATATTAGTTCTTAAGAAGGGTTCTAAACCAGATGATCAGATATGGTTTTTGGAGTTTGATACCGAATATGTTAGGCAGCTGCAAAAGAATTTGGGGACTGAGGTTGTTGCTTGGAGTAAGGGTGTAACGGGCAATGCTGAGAAACCTATTGTTATTAGTGGTCCTTCTGGAGTAGGTAAAGGAACATTGATATCAATGCTCATGAAGGAATTCCCATCTATGTTTGGGTTTTCGGTGAGCCACACCACCCGTGCTCCAAGAAATATGGAGAAAGATGGGGTCCATTATCATTTTACGGAGAAGTGTTTAATGGAGAAAGAGATTAAGGATGGGAAATTTCTCGAGTTTGCTTCTGTCCATGGCAATTTATATGGGACCAGTGTTGAGGCTGTTGAAGTGGTAGCTGATGCAGGGAAAAGATGTATACTTGACATTGATGTTCAAGGGGCAAGGTCTGTGAGGGCTAGTTCTCTTGAAGCCATATTCATCTTTATCTGTCCTCCATCGATGGAAGATCTCGAGAAGCGTCTACGTGGCAGAGGGACAGAGACAGAGGAACAGGTCCTGAAGCGATTACGAAATGCCGAGGCTGAGATCAAGGAAGGAAAGTCTTCTAAGATATTTGATTTTATCTTATACAACGACAACCTTGAGGAGTGTTATGAGAAACTTAAGAAACTATTAGGACTTGATGGTTTCGTTGCGGCCGCACCGAAATCAGAACCTAAAGAGATTATTCTACCAATGGACCACTCATTGTCAAAGATAGATGACAAAATCATCATAAACTGCATGCCTTCAGAACTAGACAAAGATTCAAAGAATTTCAGGATCATGTTGGATGTGTCCTCACTAAAAGGTGGTGCACCTGGACGGACAAGAGGGTTAGATTTTCAAGCCGTAAGCTCATTTTCTGAGTGCTTGACCGGGGCGAATCAGTTTAGCTAA 1206 0.4196 MGEAPAFFVDDLQNEPLNGFELKNGTCKTNTTIGYKTYVIGGADDGTLSIEVQIFDRNRGEWVHPTVHGTKPMSCKGHSAVLLKDRILVLKKGSKPDDQIWFLEFDTEYVRQLQKNLGTEVVAWSKGVTGNAEKPIVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRNMEKDGVHYHFTEKCLMEKEIKDGKFLEFASVHGNLYGTSVEAVEVVADAGKRCILDIDVQGARSVRASSLEAIFIFICPPSMEDLEKRLRGRGTETEEQVLKRLRNAEAEIKEGKSSKIFDFILYNDNLEECYEKLKKLLGLDGFVAAAPKSEPKEIILPMDHSLSKIDDKIIINCMPSELDKDSKNFRIMLDVSSLKGGAPGRTRGLDFQAVSSFSECLTGANQFS* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1014 401 SMART gk_7 132 318 IPR008145 -
Lan5g1014 401 Pfam Guanylate kinase 133 314 IPR008145 -
Lan5g1014 401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 314 IPR027417 -
Lan5g1014 401 Gene3D - 20 139 IPR015915 GO:0005515
Lan5g1014 401 Gene3D Guanylate Kinase phosphate binding domain 165 224 - -
Lan5g1014 401 ProSiteProfiles Guanylate kinase-like domain profile. 133 315 IPR008144 -
Lan5g1014 401 PANTHER GUANYLATE KINASE-RELATED 1 343 - -
Lan5g1014 401 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 1 343 - -
Lan5g1014 401 SUPERFAMILY Galactose oxidase, central domain 34 114 IPR011043 -
Lan5g1014 401 TIGRFAM guanyl_kin: guanylate kinase 134 314 IPR017665 GO:0004385|GO:0006163
Lan5g1014 401 CDD GMPK 135 311 - -
Lan5g1014 401 ProSitePatterns Guanylate kinase-like signature. 168 185 IPR020590 -
Lan5g1014 401 Gene3D - 140 310 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1014 Lan-Chr5 23420871 23438359 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1014 K00942 - gmx:100808931 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1014 5 23420871 23438359 Lan19g0287 19 3130846 3134232 LSH