Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0287 ATGGGAGAGGCACCAGCATTCCTTGTTGATGACTTGCAAAATGAGCCTCTCAATGGCTTTGAATTGAAAAATGGAACTTGCAAAACAACTACTACCATTGGTGACAAAACGTATGTCATTGGTGGAGCTGATGATGGAACTTTGTCCATTGAAGTTCAAATTTTTGACCGTAGTCGTGGCGAATGGGTTCATCCCACTGTGCATGGCATCAAACCCTTGTCATGCAAAGGCCACTCAGCCGTGCTTTTGAAAGATCGGATACTAATTCTTAAGAAGGGTTCTAAACCAGATGATCAAATATGGTTTTTGGAGTTTGACACACAATATGTTAGGCAACTGCAAAATAATTTCGGGAATGCGGTTGTTGTTTGGAGTAAGGGTGTGACAGGCAATGCTGAAAAGCCTATTGTTATTAGTGGTCCTTCTGGAGTAGGTAAAGGAACATTGATATCAATGCTCATGAAGGAATTCCCATCAATGTTTGGTTTTTCTGTGAGCCACACCACCCGTGCTCCAAGAAATATGGAGAAAGATGGGGTCCATTACCATTTTACCGAGAAGAGTGTAATGGAGAAAGAGATTAAGGATGGAAAATTTCTTGAGTTTGCTTCTGTTCATGGAAATCTATATGGGACCAGTGTTGAGGCTGTTGAAGTGGTAGCAGATGCAGGGAAAAGATGTATACTTGACATTGATGTTCAAGGGGCAAGATCTGTGAGGGCTAGTTCTCTTGAAGCCATATTCATATTTATCTGTCCCCCGTCAATGGAAGATTTGGAGAAGCGCCTCCGTGGCAGAGGGACAGAGACAGAGGAACAGGTCCTGAAACGACTTCGAAATGCTGAGGCTGAGATTGAGCAAGGGAATTCGTCTAAGATATTCGATTTCATCCTATACAATGACAACCTTGAGGAGTGTTACGAGAAACTTAAGAAATTATTGGGCCTAGATGGTTTTGTCACTGCCTCACCTAAATCAGCACCTAGAGAGATCATTCTACCAATGAACCACTCATTGTCAAAGATAGATGACAAGATCATCATAAACTGCATGTCTTCAGAACTAGAAAAGGAATCCAAGAATCTGATCATGTTGGATGTGTCCTCGCTAAAAGGCGGCGCACCCGGACGGACAAGACGGTTAGATTTTCAAGCCGTAAGCTCATTTTCAGATGGTTTGACCGGGATGGATCAGTTTAGCTAA 1203 0.4264 MGEAPAFLVDDLQNEPLNGFELKNGTCKTTTTIGDKTYVIGGADDGTLSIEVQIFDRSRGEWVHPTVHGIKPLSCKGHSAVLLKDRILILKKGSKPDDQIWFLEFDTQYVRQLQNNFGNAVVVWSKGVTGNAEKPIVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRNMEKDGVHYHFTEKSVMEKEIKDGKFLEFASVHGNLYGTSVEAVEVVADAGKRCILDIDVQGARSVRASSLEAIFIFICPPSMEDLEKRLRGRGTETEEQVLKRLRNAEAEIEQGNSSKIFDFILYNDNLEECYEKLKKLLGLDGFVTASPKSAPREIILPMNHSLSKIDDKIIINCMSSELEKESKNLIMLDVSSLKGGAPGRTRRLDFQAVSSFSDGLTGMDQFS* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0287 400 SUPERFAMILY Galactose oxidase, central domain 29 124 IPR011043 -
Lan19g0287 400 Pfam Guanylate kinase 133 314 IPR008145 -
Lan19g0287 400 Gene3D - 20 128 IPR015915 GO:0005515
Lan19g0287 400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 314 IPR027417 -
Lan19g0287 400 ProSiteProfiles Guanylate kinase-like domain profile. 133 315 IPR008144 -
Lan19g0287 400 SMART gk_7 132 318 IPR008145 -
Lan19g0287 400 TIGRFAM guanyl_kin: guanylate kinase 134 314 IPR017665 GO:0004385|GO:0006163
Lan19g0287 400 PANTHER GUANYLATE KINASE-RELATED 1 340 - -
Lan19g0287 400 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 1 340 - -
Lan19g0287 400 CDD GMPK 135 311 - -
Lan19g0287 400 ProSitePatterns Guanylate kinase-like signature. 168 185 IPR020590 -
Lan19g0287 400 Gene3D - 129 317 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0287 Lan-Chr19 3130846 3134232 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0287 K00942 - gmx:100808931 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1014 5 23420871 23438359 Lan19g0287 19 3130846 3134232 LSH