Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0992 ATGGTTGGAAGCATTATGGGAATGGTAAATGCATATTCAAATGGATCTGTTCACAATGGTAATGGATTAGAGGAAAAGCTTGATGAGTTAAGAGCACTTATTGGAAAAAGTGATGGTGATCCTTTGAGAATTGTGAGTGTTGGAGCTGGTGCTTGGGGAAGTGTTTTCGCAGCCATATTGCAAGATAGTTATGGCCAATTCCGGGATAAGATACAAATCAGGATTTGGAGGAGATCGGGGAGGGCGGTTGATAGAGGCAGTGCTGAACATCTCTTTGAGGTTATCAATTCAAGGGAGGATGTGTTGAGGAGGTTGATCCGGCGTTGCGCGTATCTGAAATATGTCGAAGCAAGGCTTGGTGATAGGACACTTTTTGCTGATGAGATTCTGAAAGATGGATTTTGCTTGAATATGATTGATACTCCACTTTGTCCATTGAAGGTTGTTACTAACTTGCAGGAAGCTGTTTGGGATGCTGATATTGTGGTGAATGGTTTGCCTTCGACCGAAACTCGGGAGATCTTTGAAGAGATTAGTAAGTTTTGGAATGAGAGGATCACAGTGCCTATAATAATCTCTTTGGCAAAGGGTATAGAGGCTGCATTGAAGCCAGTTCCCCATATTATAACTCCCACAAAAATGATTAACCAAGCAACTGGAGTGCCTATGGAGAACATTTTGTATCTCGGCGGTCCAAATATTGCTTCGGAAATTTACAACAAGGAGTATGCCAATGCTAGAATATGTGGAGCTGAGAAATGGAGGAAACCTCTGGCAAAGTTTCTAAGACAACCTCAGTTTGCTGTCTGGGACAACAGTGATCTTGTCACACATGAGGTCATGGGTGGCTTGAAAAATGTCTATGCAATTGGAGCTGGAATGGTAGCAGCCCTTACAAATGAGAGTGCTACAAGCAAATCTGTGTACTTTGCACACTGTACGTCGGAGATGATATTTATCACTCACTTGCTGGCTGAAAAACCTGAGAAACTTGCAGGGCCATTATTGGCCGACACTTACGTGACCTTGTTAAAAGGTCGTAATGCATGGTATGGCCAGATGCTAGCTAAGGGACAACTCAGCCCCGACATGGGTGACAGCATTAGTGGCAAAGGGATGATTCAGGGAGTGTCTGCGGTCGAGGCATTTTTCGAACTTTTGAGCCAATCGAGCCTGAACGTGTTGCATCCGGAAGAAAACAAGCCTGTTGCTCCTGTTGAGCTCTGTCCTATCTTGAAGACACTATACAAAATATTGATATCTAGGGAACAATCATCACAAGCTATTCTAAAAGCTCTGAGGGATGAAAATATGAATGATCCTCGCGAGCGCATTGAAATCGCACAAAGCCATGCTTTTTACAAACCTTCACTTCTTGGACAACAGTGA 1389 0.4341 MVGSIMGMVNAYSNGSVHNGNGLEEKLDELRALIGKSDGDPLRIVSVGAGAWGSVFAAILQDSYGQFRDKIQIRIWRRSGRAVDRGSAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKFWNERITVPIIISLAKGIEAALKPVPHIITPTKMINQATGVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRQPQFAVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEKPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGQLSPDMGDSISGKGMIQGVSAVEAFFELLSQSSLNVLHPEENKPVAPVELCPILKTLYKILISREQSSQAILKALRDENMNDPRERIEIAQSHAFYKPSLLGQQ* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0992 462 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 274 429 IPR008927 -
Lan5g0992 462 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 274 428 IPR006109 GO:0004367|GO:0005975
Lan5g0992 462 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 146 248 IPR011128 GO:0016616|GO:0046168|GO:0051287
Lan5g0992 462 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 42 274 IPR036291 -
Lan5g0992 462 Gene3D - 274 434 IPR013328 GO:0016491
Lan5g0992 462 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 1 461 - -
Lan5g0992 462 Gene3D - 136 270 - -
Lan5g0992 462 Gene3D - 24 105 - -
Lan5g0992 462 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 46 63 IPR006168 GO:0004367|GO:0006072|GO:0009331
Lan5g0992 462 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 267 291 IPR006168 GO:0004367|GO:0006072|GO:0009331
Lan5g0992 462 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 1 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0992 Lan-Chr5 23186323 23189354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0992 1 461 Acyl Lipid Metabolism Gene Families AT2G41540 86.797 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0992 K00006 - gmx:100810871 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0992 5 23186323 23189354 Lan5g0992 5 23186323 23189354 ECH
Lan5g0992 5 23186323 23189354 Lan19g0265 19 2906392 2911367 LSH