Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0265 ATGGTAGGGAGCATTATGGGAATAGTAGATGCATACTCAAATGGGTCTCTTCATCATAATTATAATGGATTAGAGGAAAAGCTTGATGAGTTAAGGGCACTTATTGGAAAAGCTGATAGTGATCCATTGATAATTGTGAGTGTTGGAGCTGGTGCTTGGGGAAGTGTTTTTGCAGCAATTTTGCAAGATACTTATGGTCAGTTCCGGGACAAGATACAAATCAGGATATGGAGAAGAGCAGGGAGGAGTGTTGATAGAGGCACTGCTGAACATCTCTTCGAAGTTATCAATTCGAGGGAGGATGTGTTGAGGAGGCTGATTCGGCGTTGCGCTTATTTGAAGTATGTTGAAGCAAGGCTTGGTGATAGGACACTCTTTGCTGATGAGATTCTGAAAGATGGGTTTTGCTTCAACATGATTGATACTCCACTTTGTCCATTGAAGGTTGTGACTAACTTGCAGGAAGCTGTTTGGGATGCTGATATTGTGGTTAATGGTTTGCCTTCGACTGAAACACGCGAAATCTTCGAAGAGATCAGTAAGTTTTGGAATGAGAGGATCACAGTGCCTATAATAATCTCTTTAGCTAAGGGTATAGAGGCTGCATTGGATCCTGTTCCACACATTATAACTCCCACAAAAATGATTAACCAAGCAACTGGAGTGCCTATGGAGAACATTCTGTATCTTGGAGGTCCAAATATTGCCTCGGAAATTTACAACAAGGAGTATGCCAATGCTAGAATATGCGGAGCTGAGAAATGGAGGAAACCTCTGGCGAAGTTTCTACGACAACCGCAGTTTACTGTCTGGGACAACAGTGATCTTGTCACACATGAGGTTATGGGAGGCTTGAAAAATGTCTATGCAATTGGAGCTGGAATGGTAGCAGCCCTTACCAATGAGAGTGCTACCAGCAAATCTGTATACTTTGCACATTGTACATCAGAGATGATATTTATAACTCACTTGTTGGCTGAAAAACCTGAGAAACTAGCAGGGCCGTTATTGGCTGACACTTACGTGACCTTGTTAAAAGGTCGTAATGCGTGGTATGGCCAGATGTTAGCTAAGGGACAATTAAGCCCTGACATGGGTGACAACATTAGTGGCAAAGGGATGATTCAGGGCGTGTCTGCAGTGGAGGCATTCTTTAAACTTCTGAGCCAATCGAGCCTGAATGTGTTGCATCCCGAAGAAAATAAGCCTGTTGCTCCTGTCGAACTTTGCCCTATCTTGAAGACACTGTACAAAATATTGATATCCAGGGAACAGTCATCACAAGCTATTCTAAAAGCTCTGAGGGATGAAAATCTGAACGATCCTCGTGAGCGCATTGAAATTGCACAAAGCCATGCTTTTTACAAGCCTTCACTTCTTGGACAACCGTGA 1392 0.4296 MVGSIMGIVDAYSNGSLHHNYNGLEEKLDELRALIGKADSDPLIIVSVGAGAWGSVFAAILQDTYGQFRDKIQIRIWRRAGRSVDRGTAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCFNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKFWNERITVPIIISLAKGIEAALDPVPHIITPTKMINQATGVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRQPQFTVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEKPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGQLSPDMGDNISGKGMIQGVSAVEAFFKLLSQSSLNVLHPEENKPVAPVELCPILKTLYKILISREQSSQAILKALRDENLNDPRERIEIAQSHAFYKPSLLGQP* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0265 463 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 47 64 IPR006168 GO:0004367|GO:0006072|GO:0009331
Lan19g0265 463 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 268 292 IPR006168 GO:0004367|GO:0006072|GO:0009331
Lan19g0265 463 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 275 430 IPR008927 -
Lan19g0265 463 Gene3D - 275 435 IPR013328 GO:0016491
Lan19g0265 463 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 1 463 - -
Lan19g0265 463 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 275 IPR036291 -
Lan19g0265 463 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 147 249 IPR011128 GO:0016616|GO:0046168|GO:0051287
Lan19g0265 463 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 275 429 IPR006109 GO:0004367|GO:0005975
Lan19g0265 463 Gene3D - 141 271 - -
Lan19g0265 463 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 1 463 - -
Lan19g0265 463 Coils Coil 14 41 - -
Lan19g0265 463 Gene3D - 25 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0265 Lan-Chr19 2906392 2911367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0265 1 463 Acyl Lipid Metabolism Gene Families AT2G41540 85.961 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0265 K00006 - gmx:100810871 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0992 5 23186323 23189354 Lan19g0265 19 2906392 2911367 LSH