Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0990 ATGGTGTCAAAACATGCTCATTTATATGAATATATAAACTTTTTATCCTTCAAAATTTTCATAACCATACTAGTACTCCTTAACTTCATTCATAAATCCAACACACTATGCAATAACTCTACATTCACTTCAATAACTCCACCTTATGAGATTCTCTCATCACTTCAAACACTACCTCTTGAAGGTTACTTTAGCCTAAGGAACAATGAGAACACTGCCAAAGACTTTGGCAACATATACCATTTTCCACCTATAGCAGTTCTTCATCCAAAAACAGTTTCTGATATTTCACAAACCATAAAGCATATATATGAAACTGGCTCTTCTTCAGAACTAAAAGTTGCTGCTAGAGGCCATGGTCATTCACTTCAAGGGCAATCACAAGTACATGGAGGGTTGGTTATTAACATGGAGTCACTTAAGGGTCCTGAAATGAGAGTTTATGGTGGAGAATCTTCACCTTATGTTGATGTTTCTGGTGGTGAGTTATGGATAAATATTCTGCATGGTAGTCTTCAACATGGGTTGGCACCAAAATCTTGGACAGATTATCTGCACCTTAGTGTTGGAGGAACTCTATCAAATGGTGGAATAAGTGGACAAGCTTTTAGGCATGGACCACAGATCAATAACATCTTCCAGCTACAAGTGGTCACAGGAAAAGGAGAGGTAGTAACATGCTCACAGCATCAAAATGCAGACCTTTTTCATGGTGTTCTTGGAGGACTTGGTCAATTTGGCATAATCACAAGGGCTACTATTTCTCTTGAACCAGCACCTAAGATGGTGAAATGGATTAGAGTGCTATACTCAAAATTCTCTATGTTTGCAAAGGATCAAGAGTATTTGATATCACTTGAAAACACATTTGATTACATTGAAGGATTTGTAATCATAAATAGAAGCAACATTCTAAATAATTGGAGTTCATCTTTCAGTCCTAAATATCCAATTCAAGCAAGCCAATTCAATTCAGATGGAAGGATCTTATATTGTCTTGAGATGGCAAAATATTTCAATCCAGATGAAGCTGAAGTAATGAATCAGAGTGTTGATCACCTTCTATCAGGATTGAGTTATATTCTACCTACACTCTTTCTATCAGAAGTTCCTTATGTGGAATTCCTTGATAGAGTGCATGCTTCTGAGAAAAAGCTAAGAGAAAAAGGCTTATGGGAAGTTCCTCATCCTTGGCTGAACCTCTTGGTACAAAAGAGTGAGATTCATGACTTTGCTGAACAAGTATTTGGCAAAATCCTTAAGGACACAAATAATGGCCCTATACTCATTTACCCTCTCAACCAAACAAGATGGAACAGTAAAACATCATTGGTTACCCCAAAGGAAGATGTTTTCTACTTGGTAGCATTCCTTTCCTCTGCAGTCCCATCTTCTACAGGTCCAAACAGTTTAGAATACATTCTAACACAAAATAAAAGAATCCTAGATTTCTGCAAACATGCCAAACTCAAAGTCAAGCAATATCTTCCTCATTACACTACTCAAGAAGAATGGCAAACCCACTTTGGATCTAGTTGGGAAGCATTTGTGAAAAGAAAAACAACATATGACCCACTTGCACTACTTGCCCCTGGTCATAGAATCTTTCAAAAGGCAATGTCTACCGAATAA 1632 0.3725 MVSKHAHLYEYINFLSFKIFITILVLLNFIHKSNTLCNNSTFTSITPPYEILSSLQTLPLEGYFSLRNNENTAKDFGNIYHFPPIAVLHPKTVSDISQTIKHIYETGSSSELKVAARGHGHSLQGQSQVHGGLVINMESLKGPEMRVYGGESSPYVDVSGGELWINILHGSLQHGLAPKSWTDYLHLSVGGTLSNGGISGQAFRHGPQINNIFQLQVVTGKGEVVTCSQHQNADLFHGVLGGLGQFGIITRATISLEPAPKMVKWIRVLYSKFSMFAKDQEYLISLENTFDYIEGFVIINRSNILNNWSSSFSPKYPIQASQFNSDGRILYCLEMAKYFNPDEAEVMNQSVDHLLSGLSYILPTLFLSEVPYVEFLDRVHASEKKLREKGLWEVPHPWLNLLVQKSEIHDFAEQVFGKILKDTNNGPILIYPLNQTRWNSKTSLVTPKEDVFYLVAFLSSAVPSSTGPNSLEYILTQNKRILDFCKHAKLKVKQYLPHYTTQEEWQTHFGSSWEAFVKRKTTYDPLALLAPGHRIFQKAMSTE* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0990 543 PANTHER CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN 19 540 - -
Lan5g0990 543 ProSiteProfiles PCMH-type FAD-binding domain profile. 80 259 IPR016166 GO:0071949
Lan5g0990 543 Gene3D - 262 495 IPR016170 -
Lan5g0990 543 Gene3D - 70 536 IPR016167 -
Lan5g0990 543 PANTHER GULONOLACTONE OXIDASE 19 540 - -
Lan5g0990 543 SUPERFAMILY FAD-linked oxidases, C-terminal domain 260 536 IPR016164 GO:0003824|GO:0050660
Lan5g0990 543 SUPERFAMILY FAD-binding/transporter-associated domain-like 70 258 IPR036318 GO:0050660
Lan5g0990 543 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 260 536 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lan5g0990 543 Gene3D - 137 261 IPR016169 -
Lan5g0990 543 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 84 119 IPR006093 GO:0016491
Lan5g0990 543 Pfam FAD binding domain 84 228 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0990 Lan-Chr5 23167154 23170921 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0990 K00279 - gmx:100777568 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0990 5 23167154 23170921 Lan19g0260 19 2877432 2881112 LSH