Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0260 ATGCACTTCTACAACTCTCTCACCTTGTGCTTCTTTTGTACCCTCATATCCCTTTCTCACTACACAATTTTCAGAAAAATCATGGTGTCAAAATCTCCTAGTTTATATTATTATCAATATATAACCTTTTTACTTATCAAGATTTTCATACTTACACACCTTATCTTTATTCACAAAGCCAACTCATGCTGCAATAACTCTACTATCACTTCATTAATTCCACCTAATGAGATTCTATCATCACTACAAACACTATCTCTTGAAGGTAACTTGAGCTTAAAGAACAATGAAAACACTGCCAAAGACTTTGGCAACATATACCATTTTCCACCTCTAGCAGTTCTTCATCCAAAAACAGTTTCTGATATTTCAAAAACCATAAAGCATGTTTATGATATTGGTTCTGCTTCAAAGTTGAAAATTGCTGCTAGAGGCCATGGCCATTCACTTCAAGGCCAGTCACAAGCATATGGAGGCTTAGTCATTAGCATGGAGTCATTGCAGGGTGGTGAAATGAAAGTTCATGCTGAAGAATTTCCTTATGTTGATGTATTTGGAGGTGAGTTATGGATAAATATTCTGCATGGTACTCTTAAACATGGGTTGGCACCAAAGTCTTGGACAGATTATCTTCACCTAAGTGTTGGAGGGACTCTATCAAATGGTGGAATAAGTGGACAAGCCTTTAGACATGGACCACAGATCAGTAACATCTTCCAGCTAGAAGTTGTCACAGGAAAAGGAGAGGTGATTACATGCTCAAAGGACCAAAATGCAGACCTTTTTCATGGTGTTCTTGGAGGGCTTGGTCAATTTGGCATCATCACAAGGGCTAGAATTTCTCTTGAACCAGCACCAAAGATGGTGAAATGGATTAGAGTGCTCTACTCACAATTCTCTCTGTTTGCCAAGGATCAAAAGTATTTGATATCACTTGAAAACACATTTGATTACATAGAAGGATTTGTAATCATAAATAGAAGTGGAATCCTTAATAGTTGGAGATTATCCTTCAGTCCTAAGGATCCACTTCAAGCAAGCCAATTCAATTCAGATGGAAGAATCTTCTACTGTCTTGAGATTGCAAAATACTTTAATCCAAATGAAACTGAACTCATGAATCAGAGTGTTGATCACCTTCTATCAAGGCTGAGTTATATTCCACCCACACTCTTTCTATCAGAAGTCACTTATGTGGAATTCCTAGATAGAGTGCATGCTTCTGAGAAAAAACTTAGAGCAAAAGGCTTATGGGAAGTTCCTCATCCATGGCTGAACCTTCTGATCCCAAAGAGTGACATTCATGACTTTGCTGAAGAAGTATTTGACAAAATCCTCAATGGCATAAATAATGGCCCCATTCTCATTTACCCTCTCAACCAAACAAGGTGGAATAGAAAAACATCCTTGATTACCCCAGAGGAAGATATTTTCTACCTGGTAGCATTCCTATCTTCTGCAGTCTCATCTTCCACAGGTACAAACAGTTTAGATTACATTCTAACACAAAATAAAAGGATCCTAGATTTCTGCAAACATACCCAAATCAGGTTCAAGCAATATCTTCCTTATTACACAAGTCAGGAAGAATGGCAAGCCCACTTTGGGTCTAGATGGAAAACATTTGTGGAAAGAAAAACAGCTTATGACCCACTAGCACTACTTGCCTCTGGCCAGAGAATCTTTCAAAAGGCAATGTCTACCACATGTTAG 1713 0.3806 MHFYNSLTLCFFCTLISLSHYTIFRKIMVSKSPSLYYYQYITFLLIKIFILTHLIFIHKANSCCNNSTITSLIPPNEILSSLQTLSLEGNLSLKNNENTAKDFGNIYHFPPLAVLHPKTVSDISKTIKHVYDIGSASKLKIAARGHGHSLQGQSQAYGGLVISMESLQGGEMKVHAEEFPYVDVFGGELWINILHGTLKHGLAPKSWTDYLHLSVGGTLSNGGISGQAFRHGPQISNIFQLEVVTGKGEVITCSKDQNADLFHGVLGGLGQFGIITRARISLEPAPKMVKWIRVLYSQFSLFAKDQKYLISLENTFDYIEGFVIINRSGILNSWRLSFSPKDPLQASQFNSDGRIFYCLEIAKYFNPNETELMNQSVDHLLSRLSYIPPTLFLSEVTYVEFLDRVHASEKKLRAKGLWEVPHPWLNLLIPKSDIHDFAEEVFDKILNGINNGPILIYPLNQTRWNRKTSLITPEEDIFYLVAFLSSAVSSSTGTNSLDYILTQNKRILDFCKHTQIRFKQYLPYYTSQEEWQAHFGSRWKTFVERKTAYDPLALLASGQRIFQKAMSTTC* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0260 570 ProSiteProfiles PCMH-type FAD-binding domain profile. 107 285 IPR016166 GO:0071949
Lan19g0260 570 PANTHER CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN 40 567 - -
Lan19g0260 570 Gene3D - 164 287 IPR016169 -
Lan19g0260 570 SUPERFAMILY FAD-binding/transporter-associated domain-like 99 284 IPR036318 GO:0050660
Lan19g0260 570 SUPERFAMILY FAD-linked oxidases, C-terminal domain 286 562 IPR016164 GO:0003824|GO:0050660
Lan19g0260 570 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 111 146 IPR006093 GO:0016491
Lan19g0260 570 Gene3D - 96 562 IPR016167 -
Lan19g0260 570 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 286 562 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lan19g0260 570 Pfam FAD binding domain 111 254 IPR006094 GO:0050660
Lan19g0260 570 Gene3D - 288 521 IPR016170 -
Lan19g0260 570 PANTHER GULONOLACTONE OXIDASE 40 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0260 Lan-Chr19 2877432 2881112 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0260 K00279 - gmx:100808738 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0990 5 23167154 23170921 Lan19g0260 19 2877432 2881112 LSH