Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0592 ATGCGAGGAAGACAGAGAGTAGCATCAAGGGATCACATATCAGCGTCTGATAAAGAAGGAAATCTAGCTTCAGTGCGTTTACCGATTGTCAAACCTGCTTGGCGACGCTCTCTGTGGCACGTAGTAGTGGCTTCAATTTCGTCATTCTTATATGGTTACCATGTTGGAGTAGTCAACGAAACCTTGGAGAGCATTTCTGTAGATCTCAGCTTTAGTGGGAATACATTGGCTGAAGGTCTTGTAGTAAGTACATGCTTAGTAGGTGCTTTTCTTGGATCATTGTTTAGCGGGTGGATAGCCGATGGGATTGGGCGTAGAAGAAGTTTTCAGTTGTGTGCATTGCCTATGATCATTGGGGCAGGAATGAGTGCAACAGCAAAAAGCCTGTGGGGCATGCTTTTAGGAAGGTTATTTGTTGGTACCGGAATGGGACTTGGCCCACCTGTTGCAGCTCTTTATGTTGCTGAGGTCTCACCTCCATCTGTAAGGGGTACTTATGGTGGCTTAACTCAGATTGCAACATGTCTTGGACTCATGAGCTCTCTATTTATTGGATTCCCAGCCAAGGGAATATTGGGTTGGTGGCGAGTTTGTTTCTGGGTATCTATTATTCCTGCTGCAGCACTTGTCCTTTTCATGGAGATCTGTGCAGAGAGTCCTCATTGGCTTTTAAAGAGAGGAAGAAGCGTTGAGGCTGAAGCTGAATTTGAGAAGCTCCTGGGTGCAGTGCATGTCAAACCTGCAATGGCTGAACTGTCAAAATATGGTGATGAATCTGATACAGTAAAACTCTCGGAGTTACTCTATGGCTGTCACTCCAGAGTGATGTTCATTGGATCTGCGCTTTTTGCTCTACAGCAACTATCTGGCATAAATGCTGTTTTCTATTTCTCTTCAACTGTCTTTGAAAGCTTTGGTGTTCCATCATATCTTGCAAACACATGCGTAGGAATTTGCAATTTATTGGGGTCAGTTGTTGCAATGATTTTGATGGATAAACTTGGAAGAAAAGTGCTTCTCCTAGGTAGCTTTTTGGGCATGGCAGGATCAATGGGTCTACAAGTTATTGCTGCGAGTTCTTTTGTATCAGGAATTGGAGCTATGTATCTATCTGTTGGTGGCATGTTGCTGTTTGTGCTTTCATTTGCTCTTGGTGCCGGTCCGGTTCCTTGTCTCCTCATGTCTGAAATACTACCCGGAAGGATCAGAGCAAAGGCAATGGCAATTTGCTTGGCCGTGCATTGGGTGATAAACTTCTTCGTTGGTCTGTTATTTTTGCGCTTACTCGAGCAACTTGGGCCACAACTCCTGTATACCTTTTTTGGTTCATGTAGTCTGTTGGCTGTGATTTTTGTGAAGAAATTTGTTCTGGAAACAAAAGGGAAGTCACTTCACGAAATCGAGATTGCACTTCTTGCACAAGGAACATCCTAA 1434 0.44 MRGRQRVASRDHISASDKEGNLASVRLPIVKPAWRRSLWHVVVASISSFLYGYHVGVVNETLESISVDLSFSGNTLAEGLVVSTCLVGAFLGSLFSGWIADGIGRRRSFQLCALPMIIGAGMSATAKSLWGMLLGRLFVGTGMGLGPPVAALYVAEVSPPSVRGTYGGLTQIATCLGLMSSLFIGFPAKGILGWWRVCFWVSIIPAAALVLFMEICAESPHWLLKRGRSVEAEAEFEKLLGAVHVKPAMAELSKYGDESDTVKLSELLYGCHSRVMFIGSALFALQQLSGINAVFYFSSTVFESFGVPSYLANTCVGICNLLGSVVAMILMDKLGRKVLLLGSFLGMAGSMGLQVIAASSFVSGIGAMYLSVGGMLLFVLSFALGAGPVPCLLMSEILPGRIRAKAMAICLAVHWVINFFVGLLFLRLLEQLGPQLLYTFFGSCSLLAVIFVKKFVLETKGKSLHEIEIALLAQGTS* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0592 477 SUPERFAMILY MFS general substrate transporter 30 468 IPR036259 -
Lan5g0592 477 CDD MFS_GLUT_like 43 458 - -
Lan5g0592 477 Gene3D MFS general substrate transporter like domains 33 472 IPR036259 -
Lan5g0592 477 ProSitePatterns Sugar transport proteins signature 1. 96 113 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lan5g0592 477 ProSitePatterns Sugar transport proteins signature 1. 327 343 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lan5g0592 477 TIGRFAM SP: MFS transporter, sugar porter (SP) family 41 467 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan5g0592 477 Pfam Sugar (and other) transporter 41 469 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lan5g0592 477 PRINTS Sugar transporter signature 48 58 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan5g0592 477 PRINTS Sugar transporter signature 133 152 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan5g0592 477 PRINTS Sugar transporter signature 286 296 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan5g0592 477 PRINTS Sugar transporter signature 372 393 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan5g0592 477 PRINTS Sugar transporter signature 395 407 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan5g0592 477 ProSiteProfiles Major facilitator superfamily (MFS) profile. 40 460 IPR020846 GO:0022857
Lan5g0592 477 PANTHER - 5 474 IPR045263 -
Lan5g0592 477 PANTHER PLASTIDIC GLUCOSE TRANSPORTER 3-RELATED 5 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0592 Lan-Chr5 11836721 11844156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0592 5 416 Organic Solute Cotransporters AT1G67300 67.773 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0592 - - aprc:113857086 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0592 5 11836721 11844156 Lan2g0438 2 4748527 4757106 LSH