Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0438 ATGCGAGGAAGACAGCGAGTAACATCAAGGGAACACATGTCTTCATATGATAAAGAAGAAAATCCAACTTCAGTGCGTTTGTCGATGGCCAAACCTGCTTGGCAGCGCTCTTTGTCTCATGTGGTAGTGGCTTCACTTTCTTCATTCTTATATGGTTACCATGTTGGAGTAGTCAATGAAACCTTAGAGAGCATTTCTATAGATCTCGGCTTTAGTGGGAATACATTGGCTGAAGGTCTTGTAGTAAGTACATGCTTAGTAGGTGCTTTTCTTGGATCTTTGTTCAGCGGATGGATAGCAGATGGGATTGGGCGTAGAAAAAGTTTTCAGCTGTGTGCTTTGCCTATGATCATTGGGGCAGGAATGAGTGCAACAGCAAAAAGCCTGTGGGGCATGCTTTTGGGAAGGTTATTTGTTGGTACTGGAATGGGACTTGGCCCACCTGTTGCAGCTCTTTATGTGGCCGAGGTGTCACCTCCATCTGTAAGAGGTACTTTTGGGGGCTTAACTCAGATTGCAACATGTCTTGGACTCATGAGTTCTCTCTTTATTGGTTTCCCAGCAAAAGGAGTAGTGGGTTGGTGGCGGGTTTGTTTCTGGGTATCTATCGTTCCTGCTGCAGCACTTGCCCTTTTTATGGAGATATGTGCAGAGAGTCCTCATTGGCTTTTAAAGAGAGGGAGAAGCGTTGAAGCTGAAGCTGAATTTGAGAAGCTCTTGGGTGCAGTACATGTGAAACCTGTAATGGCTGAACTGTCAAAGTCTAACAGAGGTGATGAACCTGATACAGTAAAACTCTCCGACTTACTCTATGGCTGCTATTCCAGAGTGATGTTCATCGGATCTGCGCTTTTTGCTTTACAGCAGCTATCTGGCATAAATGCTGTTTTCTATTTCTCTTCAACTGTCTTTGAAAGCTTTGGTGTCCCATCTTATCTTGCTAACACATGCATAGGAATTTGCAATTTATTAGGGTCAGTTATTGCAATGATTCTGATGGATAAACTTGGAAGAAAAGTGCTTCTCCTAGGTAGCTTTTTTGGCATGAGTGGAGCAATGGGTCTACAAGTTATTGCTGCAAGTTCTTTTATATCAGGATTTGGAGCTATGTATTTATCTGTTGGTGGCATGTTGCTATTTGTGCTTTCATTTGCGCTCGGTGCTGGTCCAGTCCCTAGTCTCCTTATGTCTGAAATACTACCCAGCAGGATCAGAGCAAAGGCAATGGCAATTTGCTTGGCTGTGCATTGGGTGATAAACTTCTTCGTCGGTCTATTATTTTTGCAGTTACTGGAGCAAATTGGGCCACAACTCCTGTATACATTTTTTGGTTCATTTTGTCTGTTGGCTGTGATTTTTGTGAACAAATTTGTTCTGGAAACAAAAGGGAAGTCACTTCAGGAAATTGAGATTTCACTTCTTGCACAAGAAGCACCCCAAATGAACTAG 1449 0.43 MRGRQRVTSREHMSSYDKEENPTSVRLSMAKPAWQRSLSHVVVASLSSFLYGYHVGVVNETLESISIDLGFSGNTLAEGLVVSTCLVGAFLGSLFSGWIADGIGRRKSFQLCALPMIIGAGMSATAKSLWGMLLGRLFVGTGMGLGPPVAALYVAEVSPPSVRGTFGGLTQIATCLGLMSSLFIGFPAKGVVGWWRVCFWVSIVPAAALALFMEICAESPHWLLKRGRSVEAEAEFEKLLGAVHVKPVMAELSKSNRGDEPDTVKLSDLLYGCYSRVMFIGSALFALQQLSGINAVFYFSSTVFESFGVPSYLANTCIGICNLLGSVIAMILMDKLGRKVLLLGSFFGMSGAMGLQVIAASSFISGFGAMYLSVGGMLLFVLSFALGAGPVPSLLMSEILPSRIRAKAMAICLAVHWVINFFVGLLFLQLLEQIGPQLLYTFFGSFCLLAVIFVNKFVLETKGKSLQEIEISLLAQEAPQMN* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0438 482 PANTHER - 5 476 IPR045263 -
Lan2g0438 482 Gene3D MFS general substrate transporter like domains 33 474 IPR036259 -
Lan2g0438 482 SUPERFAMILY MFS general substrate transporter 30 470 IPR036259 -
Lan2g0438 482 CDD MFS_GLUT_like 43 460 - -
Lan2g0438 482 MobiDBLite consensus disorder prediction 1 23 - -
Lan2g0438 482 PRINTS Sugar transporter signature 48 58 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan2g0438 482 PRINTS Sugar transporter signature 133 152 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan2g0438 482 PRINTS Sugar transporter signature 288 298 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan2g0438 482 PRINTS Sugar transporter signature 374 395 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan2g0438 482 PRINTS Sugar transporter signature 397 409 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan2g0438 482 PANTHER PLASTIDIC GLUCOSE TRANSPORTER 3-RELATED 5 476 - -
Lan2g0438 482 MobiDBLite consensus disorder prediction 1 19 - -
Lan2g0438 482 ProSitePatterns Sugar transport proteins signature 1. 96 113 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lan2g0438 482 Pfam Sugar (and other) transporter 41 470 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lan2g0438 482 ProSitePatterns Sugar transport proteins signature 1. 329 345 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lan2g0438 482 ProSiteProfiles Major facilitator superfamily (MFS) profile. 40 462 IPR020846 GO:0022857
Lan2g0438 482 TIGRFAM SP: MFS transporter, sugar porter (SP) family 24 469 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0438 Lan-Chr2 4748527 4757106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0438 5 418 Organic Solute Cotransporters AT1G67300 66.825 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0438 - - aprc:113857086 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0592 5 11836721 11844156 Lan2g0438 2 4748527 4757106 LSH