Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0536 ATGTCTGCTGCTGTGTGTGGAAGCAAGAGAGTTTTTTTCGAAGAACTTCCACCTTCTCCACCACTTTCGAAGAGGCTTCGTTTTTCTTCATCAACTTCACCTATTCCATTGCCTCATCATTCTCTCATCGATCAACTTCGCAATCTCTTTCCTCATATGGATCACCTCCTTTATGAGAGAGCTGTGCAAGAATCTGGCAATGATCTAGAAGCTGCCATCAAGAGGCTGAACGAGCTTTGCTTGGAAACTGATGATGGAAACACTGGAACTGCAGCTAAAGTGGAAGGTGATGGGAATGCTTCTGCTTCTGAGGTTCAGCCTGCTATGAACAACCTTCCTGTGAATGGAGCAGAATGGGTTGAATTTTTCGTTACAGAAATGAGTGTCGCTACTAATGTTGACGATGCTAGAGGCCGTGCTGCGAGAATTCTAGAGCTTCTCGAGAAATCAATCAGTGCACGTGCTAGTGCTGATGCAGCTGATGCTCTGAAAGAGGAAAATTTGATGCTGAAGCAGCAAATGGAAGTGCTGCTTAAGGAGAAGAATTCTTTTAAGAATGCTTTTAGAATCCAGCATGAACGCGTTTCTGATTATGAGGATAAGAACCAAGAGTTGCAGCGTCTGAAGCAATCGGTGTCTGAGTATCAGGAGCACATCAGAAGTCTTGAGATGAAAAACTATACTCTGAGGTTGCATTTGGAGCGCGCTTATCAGAGAAACAACCCCTTCCCCGGGCGTTTCCCTCCCGATTTCTTCTAA 759 0.448 MSAAVCGSKRVFFEELPPSPPLSKRLRFSSSTSPIPLPHHSLIDQLRNLFPHMDHLLYERAVQESGNDLEAAIKRLNELCLETDDGNTGTAAKVEGDGNASASEVQPAMNNLPVNGAEWVEFFVTEMSVATNVDDARGRAARILELLEKSISARASADAADALKEENLMLKQQMEVLLKEKNSFKNAFRIQHERVSDYEDKNQELQRLKQSVSEYQEHIRSLEMKNYTLRLHLERAYQRNNPFPGRFPPDFF* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0536 252 Coils Coil 160 180 - -
Lan5g0536 252 ProSiteProfiles CUE domain profile. 38 83 IPR003892 GO:0043130
Lan5g0536 252 CDD CUE 40 76 - -
Lan5g0536 252 SUPERFAMILY UBA-like 38 85 IPR009060 GO:0005515
Lan5g0536 252 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 252 - -
Lan5g0536 252 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 252 - -
Lan5g0536 252 Coils Coil 198 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0536 Lan-Chr5 10842033 10847711 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0536 - - lang:109347770 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0197 10 1262368 1265415 Lan5g0536 5 10842033 10847711 PCT
Lan3g0136 3 930610 933566 Lan5g0536 5 10842033 10847711 PCT
Lan5g0536 5 10842033 10847711 Lan10g0197 10 1262368 1265415 PCT
Lan5g0536 5 10842033 10847711 Lan3g0136 3 930610 933566 PCT