Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0197 ATGTCTGCTGCGGTGTGTGGAAGCAAGAGATCTTTATTCGAAGACCTTCCTCCTTCACCTCCACTTTCCTCAAAGAGGCTTCGTTGTTCTTCCTCTTCTCCAATTCGTGTTTCCCTCCACACTACTCTCCTTGATCACCTTCGATCTCTTTTTCCTCATATGGATGATCAGATTCTTGAGAAAGCGCTTCAAGAATGTGGTAATGATTTAGATGCTGCGATTAAGAGCTTGCACGGTCTCTGTTTGGATAATAATAATAATGATAATTCTGAAAATGTTCATCAAGCTGACCCTAATGTCATCGCAGGTGCTTTGGAAGATAATGGAGATGTTTCTGCTCCTGTGAATCATTCAGCTTCAAACAATCTTCCTGCCAATGGAGCAGAATGGATTGATTTGTTCGTTACAGAAATGACTTGTGCTACTAGTGTTGATGATGCTAGAGCCCGTGCTGCTAGACTGCTAGAAGTTCTTGAGAAATCGATCACTGCACATGCAAGTTCTGAGGCAACAAATGCTCTTCATAAGGAAAATTTGATGCTGAAGGAGCAAATTGAAGTGTTGACTAAGGAGAAAAACTGTTTTAAAAGTGCTTTTAGAATCCAGCTCGAACGTCTGTCTGATTATGAGAGTAAAAACCAAGAGTTACAGCAGCTGAAGCAATTGGTGTCTCAATACCAGGAGCAGATCACAAATCTTGAGGTGAATAACTATGCTCTGCGGATGCATTTGAATCAGGCACAACAGTTCAACCCTTTTCCTGGGCGTTTCCCTCCCGATGCCTTCTAA 789 0.4208 MSAAVCGSKRSLFEDLPPSPPLSSKRLRCSSSSPIRVSLHTTLLDHLRSLFPHMDDQILEKALQECGNDLDAAIKSLHGLCLDNNNNDNSENVHQADPNVIAGALEDNGDVSAPVNHSASNNLPANGAEWIDLFVTEMTCATSVDDARARAARLLEVLEKSITAHASSEATNALHKENLMLKEQIEVLTKEKNCFKSAFRIQLERLSDYESKNQELQQLKQLVSQYQEQITNLEVNNYALRMHLNQAQQFNPFPGRFPPDAF* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0197 262 CDD CUE 43 77 - -
Lan10g0197 262 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 262 - -
Lan10g0197 262 SUPERFAMILY UBA-like 34 87 IPR009060 GO:0005515
Lan10g0197 262 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 262 - -
Lan10g0197 262 Coils Coil 209 236 - -
Lan10g0197 262 Pfam CUE domain 42 76 IPR003892 GO:0043130
Lan10g0197 262 Gene3D - 36 85 - -
Lan10g0197 262 ProSiteProfiles CUE domain profile. 39 82 IPR003892 GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0197 Lan-Chr10 1262368 1265415 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0197 - - gmx:100815998 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0197 10 1262368 1265415 Lan3g0136 3 930610 933566 LSH
Lan10g0197 10 1262368 1265415 Lan5g0536 5 10842033 10847711 PCT
Lan5g0536 5 10842033 10847711 Lan10g0197 10 1262368 1265415 PCT