Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0321 ATGAAACACATTGATATCTTCTGTGCTTCACAAGCCTCAACAGCCATATGTCTTAACATGGATCCAGCAGCATCATGTTCCTCTTCAAACACCATTCAACTTGGAGGAAAAGCCATTGACCGTTACAACCCCATTATCAGTGATTCAAGAAGAACCATATCAAAAGCACTCACTACCCCATGTTCTAATTCTTCTTCTCAGATACCCATTGACCCCAAACCTTACCATGAATTACAAAACCAAAAGGCCAAGAATGACTCATCTTCCAAACCATATGGACAGAAGAAGAAAAAAACAATAAAGGGTCATGATCAGAAGAAGAAAAGTACAGCAGAAAGGGTCACTGAAAATGTGACCAATAGTTACTGTTCTAAGCCAATTGATAGTGTTATGAGGAGGAGTTGGCTTAAGCCACATGGTGAATTACTCACTCCTCCTGGTTCAACTAGATGTTTGCTTAGTGACATGAACTTAGTGGATGGTTTATCAGATAATGGACCAGTTTTGGCATTAGCTATGGTTAATGATAATAAAAAGGCTCAAGTTGTTGAGCAAATTGAAACTATCCATGCATCTAAACCCTCTACCTCTTGTCTTATAAATTCTGATTCATCAAACCAGGTTGTGGAACTGAGGGTTTCCTTGCACTGCAAAGGATGTGAAGGAAAGGTCAGGAAACACCTCTCCAGAATGAAAGGAGTTACTTCATTCAACATAGATTTTAAGGCAAAGAAGGTGACAGTAGTTGGGGATGTGACTCCATTAAGTGTATTGGCAAGCATATCAAAGGTCAAAAATGCTCAATTTTGGCCAGCATCTGCTTCAGCAGCTGGATCTGGTTTTGTAGAGAGTAGAGGAAACTTTTATATCTAA 873 0.394 MKHIDIFCASQASTAICLNMDPAASCSSSNTIQLGGKAIDRYNPIISDSRRTISKALTTPCSNSSSQIPIDPKPYHELQNQKAKNDSSSKPYGQKKKKTIKGHDQKKKSTAERVTENVTNSYCSKPIDSVMRRSWLKPHGELLTPPGSTRCLLSDMNLVDGLSDNGPVLALAMVNDNKKAQVVEQIETIHASKPSTSCLINSDSSNQVVELRVSLHCKGCEGKVRKHLSRMKGVTSFNIDFKAKKVTVVGDVTPLSVLASISKVKNAQFWPASASAAGSGFVESRGNFYI* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0321 290 MobiDBLite consensus disorder prediction 57 114 - -
Lan5g0321 290 ProSiteProfiles Heavy-metal-associated domain profile. 214 264 IPR006121 GO:0046872
Lan5g0321 290 Gene3D - 204 268 - -
Lan5g0321 290 SUPERFAMILY HMA, heavy metal-associated domain 207 264 IPR036163 GO:0046872
Lan5g0321 290 Pfam Heavy-metal-associated domain 211 263 IPR006121 GO:0046872
Lan5g0321 290 PANTHER OS08G0405700 PROTEIN 1 279 IPR044526 -
Lan5g0321 290 CDD HMA 210 263 IPR006121 GO:0046872
Lan5g0321 290 PANTHER COPPER CHAPERONE 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0321 Lan-Chr5 5349841 5352024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0321 - - gmx:100810015 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0321 5 5349841 5352024 Lan20g1025 20 11055504 11057603 PCT
Lan20g1025 20 11055504 11057603 Lan5g0321 5 5349841 5352024 PCT