Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0249 ATGTACGTTGTGCCTCCACCTCAACGATCGGATCCAGGTTCGGGATCCACTGATTTGCGGGTTTATCAAGCTTGGAAGGGTAGCAATAAGTTTTTTCTTCAAGGCAGGTTCATATTTGGACCAGATGCAAGATCCATGTTCTTGACAATTTTCCTTATTGTTGCTCCTGTTGCAGTTTTCTGTGTCTTTGTTGCCAGAAAACTGATAGATGATTTTTCTGATCACTTGGGGATAACCATAGTGGCCATTCCTGTCGTATTCACAATTTACGTCATGGTTCTTCTCTTGTTAACATCTAGCCGAGACCCTGGCATAATTCCACGCAATGCACATCCTCCAGAGCTAGAAGGTTTTGAAGGTAGTCTAGACGTCGGGGCTGGTCAAACTCCTCAACTGCGGTTGCCTCGTTTTAAGGAAGTTGAAGTTAATGGCCATTATTTGAAAGTCAAGTATTGTGATACTTGCATGCTCTACCGGCCTCCTCGATGCTCTCACTGCTCAATCTGTAATAACTGTGTCGAACATTTTGATCACCACTGCCCCTGGGTTGGGCAATGCATTGGGCTGCGCAATTATCGCTTCTTCTTCATGTTTGTCTTCTCCACTACGCTACTTTGTATATATGTTTTCACGTTTTGCTGGGTCTATATTAGACGAATTAAGGACTCAGAGGAGACATCAATATGGAAGGCAATGATCAAAACTCCGGCCTCCATAGTGTTAATAATTTACACCTTCATATCGATGTGGTTTGTTGGCGGTCTTAGCGCTTTTCATTTATATCTGATAAGTACAAATCAGACAACATATGAGAACTTCAGATATCGATATGATCGACGGGCCAACCCGTATCACAAAGGGTTGTTCAATAATTTCAAAGAGATATTCTTCACCAGCATTCCCCAATCAAAGAACAATTTCAGAGCAATGGTTCCGGTGGAACCAGCACTACCTGCGAGATCAGTGGCTGGAGGCTTTATGAGCCCGAGTATGGGAAAACCTGTTGAGGAGATAGAGATGGGCAGGAAAACAGTCTGGGACATGGGTTCTGTTGGCATTGATGATTCTCAATTAAATAATCGCTCGACGTTAAAGGATAGAGAATTGGGCGAATTGTCTCCAGAAATTAGGACGACATTAGAAGATGCAGGTGACCGTGCCGGATTACATCCTAGGAGATCTAGCTGGGGGAGAAAAAGTGGAAGCTGGGAAATGTCCCCTGAAGTACTTGCTTTGTCAGCCAGGGTTGGGGAACCTAATCGTGTGGGTGGAGGTAGCAGTAGTGGTTTGAAAACCGAGAACAGCCATAAATTAATTGTATTTGCAGGGTGGGGTGTTTATATGTGTTGTTTTAGCTATTCTGCTTTTAGGAAGGAATTGTTTTGGTGTTCTGAGTGA 1398 0.4363 MYVVPPPQRSDPGSGSTDLRVYQAWKGSNKFFLQGRFIFGPDARSMFLTIFLIVAPVAVFCVFVARKLIDDFSDHLGITIVAIPVVFTIYVMVLLLLTSSRDPGIIPRNAHPPELEGFEGSLDVGAGQTPQLRLPRFKEVEVNGHYLKVKYCDTCMLYRPPRCSHCSICNNCVEHFDHHCPWVGQCIGLRNYRFFFMFVFSTTLLCIYVFTFCWVYIRRIKDSEETSIWKAMIKTPASIVLIIYTFISMWFVGGLSAFHLYLISTNQTTYENFRYRYDRRANPYHKGLFNNFKEIFFTSIPQSKNNFRAMVPVEPALPARSVAGGFMSPSMGKPVEEIEMGRKTVWDMGSVGIDDSQLNNRSTLKDRELGELSPEIRTTLEDAGDRAGLHPRRSSWGRKSGSWEMSPEVLALSARVGEPNRVGGGSSSGLKTENSHKLIVFAGWGVYMCCFSYSAFRKELFWCSE* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0249 465 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 12 433 - -
Lan5g0249 465 ProSiteProfiles DHHC domain profile. 150 200 - -
Lan5g0249 465 PANTHER S-ACYLTRANSFERASE 12 433 - -
Lan5g0249 465 Pfam DHHC palmitoyltransferase 150 274 IPR001594 GO:0016409
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0249 Lan-Chr5 3201880 3207868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0249 79 296 Lipid Metabolism Gene Families AT4G22750 27.313 2.30e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0249 - - gmx:100799812 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0249 5 3201880 3207868 Lan20g1510 20 21950637 21956560 LSH