Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1510 ATGTATGTTGTTCCTCCACCTCGAAGATCAGATCAGGGTTTGGGATCTGGTGAATTGAGGGTTTATCAAGCATGGAAGGGTAGCAATAAGTTTTTTCTTCAAGGCAGATTCATATTTGGACCAGATGCAAGATCCTTGTTTTTGTCAATTACCCTTATCGTTGCTCCTGTTGCAGTTTTCTGTGCCTTCATTGCCAGGAAACTGATGGATGATTTTCCTGATCACTTGGGGATACTCATAATGGCCGTTCCTGTTATATTCACAATTTACGTCTTGGTTCTTCTTTTGTTAACATCTGGTCGAGACCCTGGAATAATTCCTCGCAATGCACATCCTCCAGAGCCAGAAGGTTTTGAAGGTAGTCTAGATGCTGGGGCTGGTCAAACTCCTCAATTACGGTTGCCTCGTTTTAAGGAGGTTGAAGTCAATGGCCATTATATGAAGGTCAAGTATTGTGATACATGCATGCTCTACAGGCCTCCTCGATGCTCTCACTGCTCAATTTGTAACAACTGTGTTGAACGGTTTGATCACCACTGCCCCTGGGTTGGGCAATGCATTGGGCTGCGTAATTATCGCTTCTTCTTCATGTTTGTCTTCTCAAGTACACTACTTTGTATATATGTTTTCGCGTTTTGCTGGGTCTATATTAGACGAATTATGGAGTCAGAGGAGATAACAATTTGGAAAGCAATGATCAAAACTCCGGCCTCCATAGTGTTAATAGTTTACACCTTCTTATCAATGTGGTTTGTTGGTGGACTTAGTGGCTTTCACTTATATCTGATAAGTACAAATCAGACAACATATGAAAACTTCAGGTACCGATATGATCGACGGGCCAACCCATATAACAAAGGGTTGTTCAATAATTTCAAAGAGATATTCTTCACCAGCATTCCCCAATCAAAGAACAATTTCAGGGCAATGGTTCCGGTGGAACCAGCATTACCTCCCAGATCAGTGTCTGGAGGCTTTATGAGCCCAAGTATGGGAAAAGCTGTTGATGACATAGAGATGGGAAGGAAAACAGTTTGGGACATGGGTTCTGCTGGCATTGATGATTCTCAATTAAATAACCGCCCGACTATAAAGGATGGAGAATTGGGTGAACTGTCTCCAGAAATTAGGACGACAGTGGACGAAGCGGGTGACCATGTCGGATCACATCCTAGGAGATCTAGCTGGGGTAGAAAAAGTGGAAGCTGGGAAATGTCCCCTGAAGTACTTTCTCTGGCAGCCAAGGTAGGGGAACCTAACCGCACCGGTGGAGGTGGCAGTAGCGGTTCGACAACTGAGAACAGCCATACGTAG 1314 0.4399 MYVVPPPRRSDQGLGSGELRVYQAWKGSNKFFLQGRFIFGPDARSLFLSITLIVAPVAVFCAFIARKLMDDFPDHLGILIMAVPVIFTIYVLVLLLLTSGRDPGIIPRNAHPPEPEGFEGSLDAGAGQTPQLRLPRFKEVEVNGHYMKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRFFFMFVFSSTLLCIYVFAFCWVYIRRIMESEEITIWKAMIKTPASIVLIVYTFLSMWFVGGLSGFHLYLISTNQTTYENFRYRYDRRANPYNKGLFNNFKEIFFTSIPQSKNNFRAMVPVEPALPPRSVSGGFMSPSMGKAVDDIEMGRKTVWDMGSAGIDDSQLNNRPTIKDGELGELSPEIRTTVDEAGDHVGSHPRRSSWGRKSGSWEMSPEVLSLAAKVGEPNRTGGGGSSGSTTENSHT* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1510 437 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 13 434 - -
Lan20g1510 437 MobiDBLite consensus disorder prediction 381 437 - -
Lan20g1510 437 Pfam DHHC palmitoyltransferase 148 274 IPR001594 GO:0016409
Lan20g1510 437 ProSiteProfiles DHHC domain profile. 150 200 - -
Lan20g1510 437 PANTHER S-ACYLTRANSFERASE 13 434 - -
Lan20g1510 437 MobiDBLite consensus disorder prediction 423 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1510 Lan-Chr20 21950637 21956560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1510 80 296 Lipid Metabolism Gene Families AT4G22750 28.261 1.26e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1510 - - gmx:100799812 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0249 5 3201880 3207868 Lan20g1510 20 21950637 21956560 LSH