Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0228 ATGGTGGGAAGGACTCTCAGTCCGATGCTGCAGCGTCAGCTGGAAAATCTCGACAAAGATGAAGATAGCCGCAAATCTGCAATGAGAGCATTGAAGTCATATGTGAAAAATATGGACTTTAAGACAATTCCGACATTTCTTGCACAAGTTTCTGAGACCAAGGAAACTGGTTCATTGTCTGGAGAATTCACAATTTCGCTCTATGAAGTCCTAGCCCGGGTTCATGGGGTCAAGATTGTTCCCATGATAGACAGTATCATGCAGTCCATAGTTCAGACCTTAGCTTCAAGTGCAGGGTCTTTCCCTCTTCAGCAGGCTTGTTCAAAGGTGGTTCCAGCTATTGCGAGATATGGGATTGACCCAACAACCCCAGAAGACAGGAAGAGGCTTATAATTCATTCACTTTTTAAGCCGCTTTCCGATTCCCTCTCGAGTTCTCAAGAGTGTTTATCTTCTGGTGCAGCCCTTTGCTTGGAGGCTCTTGTGGATTCAGACAATTGGCGATTCGCTTCAGCTGAAATGGTAAACAAGGTTTGCCAGAACGTAGCTGTTGCATTGGAAGTAAAGTCCACTCAGACCAATTCACACATGGGTCTAGTTATGGCGCTAGCAAAGCGCAATCCTTTGATTGTTGAAGCATATGCAAGACTTCTCATACAATCCGGATTAAGAATACTCAATGCTGATGCTGAGCTTTCGGAGGGGAATTCACAGAAGCGATTTGCAGCTATTCAAATGATGAATTTCTTGATGAAATGTTTAGATCCCAGGAGCATTTTCTCAGAAGTTGAGCTGGTAATTGATGAGATGGAGAAGTGTCAGTCTGATCAAATGGCATATGTCAAAGATGCTGCATTTGAAGCTTTGCGAACTGCTAAGAAAGTTGCAATTGACAAAAAATCAAGAAGTTTAACGAGTCCTACTTCAGTGACAGGATCCAATTTCAGCAGAAGAGACTATATGGGAGGTGGCAGTTTTTCTGGTGACGTAGACCTCTCTCCTCAATCTATTTCACCAGAATCGCAGAACTTAGACTTTTTGCCTAGATATGAATCTGTTTTGGAGTCTCCGATTTCAACAGATCAGCCTTTGATGAGCTCAAACTATGAGCAAAGGAGTGTGAATCGGAAGCTATGGAGTCAAGAAAATGGAGGGGTTGATGTGTCTCTCAAGGACGGTATGTTCTCAGAGGCTGGGCAGTTGTCCAATCACTCAGTGGATCATGAGCCTTCTAATGGAGATAGAGGAGTTGCAGAGGAATTTTCTGGTTTCATGCACAGAAATCAATTGAATAGAGTATCCCGAAGTACCACCTCGAGTCCCCTGAGATCGCACACACAGGTTAGCGTTGACAGCATTCAAATCTTTGAGACCCCTAGGAGGCTCATTCACTCTCTTCAAGACCTAGATGTTGTGAATTCAGATTGCTCTGAGAAACGGAATAGAAGGACCAGGAGTCGATTATCAGGCAGTATCGACTGGAGCCCAGTGTCTAGTTCCAGATATGACCAGACTGGTTTCGCAGATCATGTAAACTATGACGATGGTGAAGATAATGAAAGTTTATATGCTGATGTGCCATTCGAAAATGCATCAGAGTCAGTCTCATCCACAGACGGCCTTTCTGGTGCTGCTGTTGATATGCAGATACCTCCTAAGGTGGTTCCGGAAAATCGACTTCTAAAGACTAGGCGTAAATTGGTTTGTGGCCTTTCTTTTGTTCTCGTTGCAATGGTTACTCCCTTATTCTGGATCAACAATCAGGAAGAAGCGCATTATCTTGTCCCAACATAA 1794 0.4376 MVGRTLSPMLQRQLENLDKDEDSRKSAMRALKSYVKNMDFKTIPTFLAQVSETKETGSLSGEFTISLYEVLARVHGVKIVPMIDSIMQSIVQTLASSAGSFPLQQACSKVVPAIARYGIDPTTPEDRKRLIIHSLFKPLSDSLSSSQECLSSGAALCLEALVDSDNWRFASAEMVNKVCQNVAVALEVKSTQTNSHMGLVMALAKRNPLIVEAYARLLIQSGLRILNADAELSEGNSQKRFAAIQMMNFLMKCLDPRSIFSEVELVIDEMEKCQSDQMAYVKDAAFEALRTAKKVAIDKKSRSLTSPTSVTGSNFSRRDYMGGGSFSGDVDLSPQSISPESQNLDFLPRYESVLESPISTDQPLMSSNYEQRSVNRKLWSQENGGVDVSLKDGMFSEAGQLSNHSVDHEPSNGDRGVAEEFSGFMHRNQLNRVSRSTTSSPLRSHTQVSVDSIQIFETPRRLIHSLQDLDVVNSDCSEKRNRRTRSRLSGSIDWSPVSSSRYDQTGFADHVNYDDGEDNESLYADVPFENASESVSSTDGLSGAAVDMQIPPKVVPENRLLKTRRKLVCGLSFVLVAMVTPLFWINNQEEAHYLVPT* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0228 597 PANTHER PROTEIN SINE1 3 597 - -
Lan5g0228 597 PANTHER GEMIN2 3 597 - -
Lan5g0228 597 Gene3D - 3 305 IPR011989 -
Lan5g0228 597 SUPERFAMILY ARM repeat 7 291 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0228 Lan-Chr5 2818266 2821675 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0228 - - gmx:100820627 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0228 5 2818266 2821675 Lan8g1019 8 12118681 12121625 LSH
Lan5g0228 5 2818266 2821675 Lan20g1473 20 21438647 21441826 LSH
Lan5g0228 5 2818266 2821675 Lan5g0228 5 2818266 2821675 PCT
Lan5g0228 5 2818266 2821675 Lan8g1019 8 12118681 12121625 PCT
Lan5g0228 5 2818266 2821675 Lan20g1473 20 21438647 21441826 PCT
Lan8g1019 8 12118681 12121625 Lan5g0228 5 2818266 2821675 PCT
Lan20g1473 20 21438647 21441826 Lan5g0228 5 2818266 2821675 PCT