Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1473 ATGGTGAGAAGAGCTCTCAGTCCAATGCTGCGGCGCGAGCTTGAAAATCTTGACAAAGATGCAGATAGTCGCAAATCTGCAATGAGAGCATTGAAGTCATATGTGAAAGATTTGGACTTTAAGACAATTCCTATATTTCTTGCTCAAGTTTCGGAGACCAAGGACACTGGTTCGTTGTCCGGAGAATTCACGATTTCACTCTACGAAGTTCTTGCCCGGGTTCATGGTGTCAAGATTGTTCCCATGATAAACAGTATCACACAGTCCATAGTTCAGACCTTAGCTTCAAGTGCAGGGTCTTTCCCTCTTCAGCAGGCTTGCTCAAAGGTGATTCCGGCTATTGCAAGATATGGAATTGATCCTACAATGCCAGAAGAGAAGAAGAGACATATAATTCATTCACTTTGTAAACCTCTTTCGGATTCTCTCTCGAGTTCTCAGGAGTGTTTGTCTTCCGGAGCAGCCCTTTGCTTGAAGGCTCTTGTGGATTCGGATAATTGGCGATTCGCTTCAGACGAAATGGTAAACAAGGTTTGCCAGAATGTTGCTGTGGCATTAGAAGGAAAGTCCACTCAGACCAATTCACACATGGGATTGGTTATGGCACTATCGAAGCGCAATCCTTTGATTGTTGAAGCCTATGCAAGATTGTTCATACAATCTGGATTGCGAATGCTTAATGCTGAGCTTTTGGATGGAAATTCGCAGAAGCGATTTGCAGCTATTCAGATGGTGAATTTCTTGATGAAATGTTTAGATCCCAGGAGCATTTTCTCCGAAGTCGAGCTGGTAATTGAAGAGATGAAGAAGTGCGAGTCTGACAAAATGGCATATGTCAAAGGTGCTGCTTTCGAAGCTTTGCAAACGGCTATGAAAGTTGTAATTGACAAAAAATCTAGATATGTAAAGAGTCCTGCTTCAGTGACAGGGTCCAATTTCAGCAGAAGAGACTATATGGAAGGTGACAGTTTTTCTGGTGATGGAGGCTATTCTCCTTCATCTATTTCACCCGAATCGCAGACCTTGGACTATTTCCCTGGAGACGAATCTATTGTCGGGTCTCCCGTTTCAACAAATCAGCCTTCGCTGAACTCAAACTACGAGCGAAGGAGTGTGAATAGGAAGTTATGGAGTCAAGAAAATGGAGGAGTTGATCTTTCTCTCAAGGACGGTTTGTTTTCTGAGGCAGGGCAGAGAATTGGCTTGTTTGAACACTCTGAGGATCATGAGCTTTCTAATGGAGGCGGTGGACTTACAGAAGAATTTTCCGGTTTCATGCTCGGAAATCAATCGAATAGAGTATCCGGAAGTGCCACCACAAGCCCCCTAAGATCACACACACGGGTTACTGTTGACAGCAATAAAATCTTTCAGACCCCTAGGAAGCTCATCAACTATCTTCAAGACCTAGATGATGTGAATTCAGAAAGCTCTGAGAAACAGAATAGAAGGATCAGGAGTCTATCATCGGGCGATATTGAGTGGAGTCCGACACCTAATTCTGCATATAACCAGAATGATTTTGCAGATCATGTAAACTACGATGACGATGAAGATAACGAAAGCTTATATGCTGATGTGCCATTTGAAGGCGGATCAGAGTTTGTCTCATCAACAGATGACCTTCCTGGTGATGTTGATATGCAGATGATTGCTGAGGTTGTTCCCGAAAATCGACTTCAAAAGACTAAGCGCAAATTGTTTTGTGGCCTTTCTTTTGTTCTTGTTGCAATCGCTACTCCCTTATTTTGGATCAACAGCCAGGAAGAAGGTCATTATCTTGTGCCAACATAA 1794 0.4309 MVRRALSPMLRRELENLDKDADSRKSAMRALKSYVKDLDFKTIPIFLAQVSETKDTGSLSGEFTISLYEVLARVHGVKIVPMINSITQSIVQTLASSAGSFPLQQACSKVIPAIARYGIDPTMPEEKKRHIIHSLCKPLSDSLSSSQECLSSGAALCLKALVDSDNWRFASDEMVNKVCQNVAVALEGKSTQTNSHMGLVMALSKRNPLIVEAYARLFIQSGLRMLNAELLDGNSQKRFAAIQMVNFLMKCLDPRSIFSEVELVIEEMKKCESDKMAYVKGAAFEALQTAMKVVIDKKSRYVKSPASVTGSNFSRRDYMEGDSFSGDGGYSPSSISPESQTLDYFPGDESIVGSPVSTNQPSLNSNYERRSVNRKLWSQENGGVDLSLKDGLFSEAGQRIGLFEHSEDHELSNGGGGLTEEFSGFMLGNQSNRVSGSATTSPLRSHTRVTVDSNKIFQTPRKLINYLQDLDDVNSESSEKQNRRIRSLSSGDIEWSPTPNSAYNQNDFADHVNYDDDEDNESLYADVPFEGGSEFVSSTDDLPGDVDMQMIAEVVPENRLQKTKRKLFCGLSFVLVAIATPLFWINSQEEGHYLVPT* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1473 597 MobiDBLite consensus disorder prediction 324 365 - -
Lan20g1473 597 MobiDBLite consensus disorder prediction 473 487 - -
Lan20g1473 597 PANTHER PROTEIN SINE1 4 597 - -
Lan20g1473 597 MobiDBLite consensus disorder prediction 473 509 - -
Lan20g1473 597 MobiDBLite consensus disorder prediction 327 343 - -
Lan20g1473 597 MobiDBLite consensus disorder prediction 488 508 - -
Lan20g1473 597 PANTHER GEMIN2 4 597 - -
Lan20g1473 597 Gene3D - 3 317 IPR011989 -
Lan20g1473 597 SUPERFAMILY ARM repeat 10 292 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1473 Lan-Chr20 21438647 21441826 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1473 - - cam:101511812 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0228 5 2818266 2821675 Lan20g1473 20 21438647 21441826 LSH
Lan8g1019 8 12118681 12121625 Lan20g1473 20 21438647 21441826 LSH
Lan5g0228 5 2818266 2821675 Lan20g1473 20 21438647 21441826 PCT
Lan20g1473 20 21438647 21441826 Lan5g0228 5 2818266 2821675 PCT