Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0921 ATGACTATGGGGCACAAGCATTTATTTGCGGCTTTCTGTTTATGGGCGTTAACATCTTCCGTTCTTCCTTCTTTCTCAAATGGACTTTTGAGAATTGGTTTGAAGAAGAAACCTCTTGATCTTCAGAGTCTTTATGCTTCTAAAAATGCAAGAGAAAATCTGAGGCTAGGAAGACCAATGATGGGTGTATATGATAAGTATATTGGTAATTCAAAAGGTGAAGATATAGTACCTTTGACTAACTATTTGGATGCTCAATATTTTGGTGAGGTTGGAATTGGTACACCCCCACAGAAATTTACTGTCGTATTCGATACCGGTAGTTCTAACCTTTGGGTTCCATCATCAAAATGCTATTTTTCCATTGCCTGCTATGCCCATAATTGGTACAAAGCAAAGAAATCAAATACATATACCAAAAACGGAACATCATGTAAGATAAGCTATGGCTCTGGAGCAATATCTGGTTTCTTCAGTCAAGATAATGTTAAAGTTGGCAGCGTTGTTGTCAAGAATCAGGATTTCATCGAGGCTACCCGAGAAGGAAGTCTTTCCTTTCTGGCAGGAAGGTTTGATGGAATACTTGGGCTTGGGTTTCAGGAGATCTCAGTTCAAGATGCTGTGCCAGTATGGTACAATCTTGTGGAACAACATCTTGTAACAGAGAAAGTATTCTCTTTTTGGCTCAACGGGGATCCAAATGCGAAAAAAGGCGGTGAATTAGTTTTTGGTGGTGTTGACCCAAACCACTTCAAAGGAGAACACACTTATGTTCCAGTTACAAGAAAAGGTTACTGGCAGATTGAAATGGGAGATTTTCTCATTGGAGGTCTTTCAACAGGTGTTTGTGAGGGTGGCTGTGCTGTTATTGTGGATTCAGGAACATCTTTGCTTGCCGGTCCAACTCCTGTTATTGCTGAAATCAACCATGCTATCGGAGCTGAAGGAGTTCTGAGTGTAGAATGTAAGGATGTTGTTTCTCAATATGGAGAGTTGATATGGGATCTCTTAGTATCAGGGGTAAAACCTGCTGACATATGTTCGCAAGTCGGGTTATGCTCATTCAACAAGGATCTATCTAAGAGCGCTGGGATCGAGATGGTGACCGAAAAGGAACAGGCAGAGTCAAAAGCTAGAGGAGATACTCCTTTGTGTTCATCTTGTCAAATGCTTGTGATTTGGATCCAGAATCAACTAAAACAAAAGGCAACAAAGGAAAGAGTATTCAGCTATGTGAACCAACTATGTGAAAGTCTTCCAAGTCCAGCTGGTGAGTCAGTGATAAGCTGCAATCGTCTTTCTCAGATGCCAAACATTACGTTCACTATCGGAGACAAACCTTTTGTCCTCACACCGGATCAGTATATTCTGAGAACCGGAGAAGGCATCACGGAAGTCTGCCTTAGTGGTTTTATTGCTCTCGATGTTCCTGCTCCACGGGGTCCACTCTGGATTCTTGGTGATGTTTTCATGAGGGTATATCACACAGTCTTTGACTATGGAAATGTCCAAGTTGGTTTTGCCCTAGCTGCTTAA 1536 0.4154 MTMGHKHLFAAFCLWALTSSVLPSFSNGLLRIGLKKKPLDLQSLYASKNARENLRLGRPMMGVYDKYIGNSKGEDIVPLTNYLDAQYFGEVGIGTPPQKFTVVFDTGSSNLWVPSSKCYFSIACYAHNWYKAKKSNTYTKNGTSCKISYGSGAISGFFSQDNVKVGSVVVKNQDFIEATREGSLSFLAGRFDGILGLGFQEISVQDAVPVWYNLVEQHLVTEKVFSFWLNGDPNAKKGGELVFGGVDPNHFKGEHTYVPVTRKGYWQIEMGDFLIGGLSTGVCEGGCAVIVDSGTSLLAGPTPVIAEINHAIGAEGVLSVECKDVVSQYGELIWDLLVSGVKPADICSQVGLCSFNKDLSKSAGIEMVTEKEQAESKARGDTPLCSSCQMLVIWIQNQLKQKATKERVFSYVNQLCESLPSPAGESVISCNRLSQMPNITFTIGDKPFVLTPDQYILRTGEGITEVCLSGFIALDVPAPRGPLWILGDVFMRVYHTVFDYGNVQVGFALAA* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0921 511 ProSiteProfiles Saposin B type domain profile. 381 422 IPR008139 -
Lan4g0921 511 CDD phytepsin 77 508 IPR033869 GO:0004190
Lan4g0921 511 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 5 510 IPR001461 GO:0004190|GO:0006508
Lan4g0921 511 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 102 113 IPR001969 GO:0004190|GO:0006508
Lan4g0921 511 Pfam Saposin-like type B, region 2 321 353 IPR008138 -
Lan4g0921 511 SUPERFAMILY Acid proteases 11 508 IPR021109 -
Lan4g0921 511 Gene3D - 317 420 - -
Lan4g0921 511 PRINTS Pepsin (A1) aspartic protease family signature 93 113 IPR001461 GO:0004190|GO:0006508
Lan4g0921 511 PRINTS Pepsin (A1) aspartic protease family signature 239 252 IPR001461 GO:0004190|GO:0006508
Lan4g0921 511 PRINTS Pepsin (A1) aspartic protease family signature 289 300 IPR001461 GO:0004190|GO:0006508
Lan4g0921 511 PRINTS Pepsin (A1) aspartic protease family signature 484 499 IPR001461 GO:0004190|GO:0006508
Lan4g0921 511 Gene3D Acid Proteases 30 245 IPR021109 -
Lan4g0921 511 ProSiteProfiles Peptidase family A1 domain profile. 87 508 IPR033121 -
Lan4g0921 511 Gene3D Acid Proteases 246 511 IPR021109 -
Lan4g0921 511 ProSiteProfiles Saposin B type domain profile. 317 357 IPR008139 -
Lan4g0921 511 SMART sapb_4 281 353 IPR008139 -
Lan4g0921 511 Pfam Saposin-like type B, region 1 383 420 IPR007856 GO:0006629
Lan4g0921 511 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 5 510 - -
Lan4g0921 511 Pfam Eukaryotic aspartyl protease 86 509 IPR033121 -
Lan4g0921 511 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 289 300 IPR001969 GO:0004190|GO:0006508
Lan4g0921 511 SUPERFAMILY Saposin 318 420 IPR011001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0921 Lan-Chr4 11241303 11246279 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0921 K08245 - gmx:548009 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0921 4 11241303 11246279 Lan20g0595 20 4655394 4659857 PCT
Lan20g0595 20 4655394 4659857 Lan4g0921 4 11241303 11246279 PCT